Gene Cpin_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1783 
Symbol 
ID8357934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2164058 
End bp2164759 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content45% 
IMG OID644963971 
Producthypothetical protein 
Protein accessionYP_003121480 
Protein GI256420827 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACAA TACTCTGTTT AATGACAGCC CTTTTGATGG TATTCACGGC CTGTAAAAAA 
GATGAATACT TCCAGGATTC AGGAAAACAT GATCCTGCTT TTAAAGGAAC TACCATGGAT
TACCTGGATG CGGTTCCTCT CTACTTTGAT TCGCTGGCCA CAATAGTGAG ACTGGCAGGA
ATGGAAGAGG TATTCAAAAG CGATACCCTG ACATTCTTCG CGCCGACCGA TAGAAGTATA
CTCCGGCTGG TACGGGAATT GAACTACAGC CTGTATTATC AGGGACACGA TACAATAAAA
ACACTCGCTG ACGTGCCACA GCGCATCTGG CAGAAGTATC TGCAGATGTA CATGTTCCAT
GGCGCTAATG AGCTGAAAGA TTATCCACAG ATAGATTATA ACCTGCTGAA TACTTATCCT
GGTCAGGGAT ACCTGTCCTG GTTCGGTACC CCCATGAATA TCGGTGTTAT CTACAATGAT
GATAACGGTG TGAAATATGT TGGCTACCGC CAGTTAACGA TTGCCTGGAT ACCTGATCCG
GCGAAGCCAA AAGACAACTG GATCATTGAA CGTATTGCGT CCTGTAATAT CACTACCTAC
AATGGCGTGG TGCATACGAT CAATGATAAT CATCTTTATT TCGGTTTCAG CGCGTATCTC
TTTATCTCCG ATGTGATCGC TGCAATGGAA AACGGAGGTT AA
 
Protein sequence
MRTILCLMTA LLMVFTACKK DEYFQDSGKH DPAFKGTTMD YLDAVPLYFD SLATIVRLAG 
MEEVFKSDTL TFFAPTDRSI LRLVRELNYS LYYQGHDTIK TLADVPQRIW QKYLQMYMFH
GANELKDYPQ IDYNLLNTYP GQGYLSWFGT PMNIGVIYND DNGVKYVGYR QLTIAWIPDP
AKPKDNWIIE RIASCNITTY NGVVHTINDN HLYFGFSAYL FISDVIAAME NGG