| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1782 |
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| Symbol | |
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| ID | 8357933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2162515 |
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| End bp | 2164047 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644963970 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003121479 |
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| Protein GI | 256420826 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGA GGTTTATTTA TATCACTACC TGTTTACTGC TGATCAGTCA GTACGGGTGC
AAAAAGTTCC TGAACGTGGA GCCGCTGGAC CGGCTCTCAG GTAATACCTT CTTCAAAACA
GCGAAAGATG TGGAAGATAA TGCCTGGGAC ATCTATGGTC TTTTCAGGGA TGTAACAGGT
TCCTGTCCGC TGTTTGCGAT GGCAGGGGAG GCCCGGGGAG GTATGCTGGC CATGTCGCCA
AAGGGCGATG GTTCAGACAG AACCTTTGTG GAGTATATCG CGAAGAATGA CCTGCTCTCT
GTTATTTACA GACCGGCAGG GAAGGAATTC TGGGACATTT TCGACCTGTA TAACATGGCG
GACTGGAAGC CCTATTATCG CGTTATACAG GCTTGTAATA TCCTTATTTA CGAAGTAGAC
AGACGCCAGA TACCCGATCT GACAGAAGCC CGTAAAAAGG CTTATAAAGC CGAAGCAACC
TTTATGCGTT GTCTGAGCTA TTTTATCATG GTGAGAATGT GGGGAGATGT AGTGTACTAC
ACTGACGCCT ATCATGAGGC TCCCTTACCC AGGGAGAAAA TGGTCAACGT GGTGAATAAC
TGTATCAATG AACTTACCGC CGTACTGGGC GATATGCCAT GGTCATTTAC AGAACCGGCC
TACCAGGGCG CCAGAGCAAG CAAAGGCGCT GCTATTGGTT TGCTGATGGA GTTACATATG
TGGAACGCCG GTTTTGATAA AATCAATGCG CAGCAGCATT ACAAGGCTAC CGCCGATCTG
GGTGATGAGA TGATCAAGAG CGGCGCTTAT TCACTGCTGC CTATTGAAGA GTCATTCACC
ATCTTTAAAG GCCGTTCAAG AGAAAGTCTG TTTGATATCG TGATCAGCTC CAACTATGGA
GAAGGACTGG CAGAAAAATG GAATGACCTT TCTGAATTTG TTGTGCATTA CCCCTATAAA
CGTCCTGCAT ACAATCACCA GTATAGTTTT ACCTACTTCC GGGCAGAATA CCTGCGACGC
CTCTATCCGA CTGGTGTGCC TGACGCAAGA ATAGAAATGT GGTTTGACTC ACAGATGTTT
GCCAATGACG GCACTTTCAT GTTCCTCAAG TATAACAGCC TTTATGAACA GGGTAACTCA
GATGTGAATG TGGATAACAA CCTCATCGTA TTGCGGTACG CAGGCGCTAT TCTCCTCAGA
GCAGAAGCAC TGGCTGAACT GGGCGAAACG CAGACCGCTG AGGCCATCAG GATGATGAAT
ATGATCAGGC TGCGCGCTAA AACACCTGTA TATCAGGGTG GCGGCGGACA AGCCCTCAAA
GACGCCATCT TCACAGAAAG AGCAAAAGAA CTGATGATGG AAGGTCACTA CTATTTCGAC
CTGGTACGTA CCGGTCGTGT TACCAACCAG CAATGGTGTT ATTATCCGCT TACACAGGCG
CAGTTTGATA ATGGCGGATG GACCTGGCCT ATCAATACCG GCGCGCTGGA TAACAACCCT
TATATGCAAC TGAACAACTA TTGGTTAAGA TAA
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| Protein sequence | MIRRFIYITT CLLLISQYGC KKFLNVEPLD RLSGNTFFKT AKDVEDNAWD IYGLFRDVTG
SCPLFAMAGE ARGGMLAMSP KGDGSDRTFV EYIAKNDLLS VIYRPAGKEF WDIFDLYNMA
DWKPYYRVIQ ACNILIYEVD RRQIPDLTEA RKKAYKAEAT FMRCLSYFIM VRMWGDVVYY
TDAYHEAPLP REKMVNVVNN CINELTAVLG DMPWSFTEPA YQGARASKGA AIGLLMELHM
WNAGFDKINA QQHYKATADL GDEMIKSGAY SLLPIEESFT IFKGRSRESL FDIVISSNYG
EGLAEKWNDL SEFVVHYPYK RPAYNHQYSF TYFRAEYLRR LYPTGVPDAR IEMWFDSQMF
ANDGTFMFLK YNSLYEQGNS DVNVDNNLIV LRYAGAILLR AEALAELGET QTAEAIRMMN
MIRLRAKTPV YQGGGGQALK DAIFTERAKE LMMEGHYYFD LVRTGRVTNQ QWCYYPLTQA
QFDNGGWTWP INTGALDNNP YMQLNNYWLR
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