| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1779 |
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| Symbol | |
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| ID | 8357930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2156702 |
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| End bp | 2158282 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963967 |
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| Product | Carbohydrate binding family 6 |
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| Protein accession | YP_003121476 |
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| Protein GI | 256420823 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00214562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACA TTCAGCAACT GCTTGCGCTG TGTATCTGTG TCGTGCTGCT CTATGGCGGA
TGCAAAAAGG ACAGTGGGTA CTATGGTTAT CAGAATCAGT TACAGGAATT TGATGGCACT
ACCTACGATT TCCTGAAAAA TGAACACCAG TACGATTCCT TCCTGCTGGC AGTAGAAAGG
GTGCACCTGA CTGATACGCT GAAGAATGGT TTATATACCG TATTCGCACC TACTGACGCC
AGTTTCAAAC AGGCTATTGA AAATATGAAT ACCCTGCGTA CTATACAGGG AAGAGCACAT
ATGTATATCA ATACCGTTCC CTATGAACAG CTCGATACCC TGGTATGCCG GTATTTTGTA
AGAGATACTT TTTCCTCACA CGTGATGACT TTACAGGATG GTCTCGGACT GACGACTATC
CGCTACAACT ACCCAATGCA TGGTAAGTTC AAACGTACAG ATGCAGAAGG CCATGTCAGT
GGCGGTCCCG GCGTCATCAC CTACAGTGAT ACCAAAGGCG TAATCTATAC GAATCGCTGG
AGCAACGCGA CGACCGTAGC CCTCGATATC GTTACGAAGA ATGGTTATGT CAACGTGCTG
GAAAAGGATC ACATGTTTGG ATTTGATGAA TTCATCCCAA GAATGAATCC AACGGTTTCT
TCTCCCTGGA ATGATTATCC TTTCTATATA CCTGGTGTAG TCGGATTAGA ACAATACAAC
CGTGGCGGTA ACAAAGTCGC CTACCTGGAC TTCTCCCTGA ACAACCAGGG TGGCCAGTAT
CGCCCTGCTG ATCAGGTGGA TATTACAACT GCCGGTGAAG GTGGCCTGAA GGTGGGATGG
ACAGAAACGG GAGAGTGGAT GGATTACACT GTAGAAGTAA CGCAAACTGG TGAATACGAT
ATGACCTTAC GTTACGGTAG CGGAGGTGAT GACGGTCGTG TACACCTGGA AATGGATGGT
CGTCCGGTAG TAGGTAGCTC CGTTGTTATG CCTGGTTCCG GCGGCTATGA TAACTTCCGG
GATATTACTA CTACTGTTCA GCTGACAGCC GGCCGGCATC TGATGAAGGT CTATTTTGAC
TTTGCCAACT TCGATCTGCG CTTCCTCAAA TTTGTCATTA AGAATGCTCC CATGCCTATA
CCTGGCGTCA TCGCCCTGGA AGACTACGAT CCAGGTGGGG AAGGTGTTGG CTACCATGAT
ACCAATACGA GGAATGAAGG TAATAAGTAC AGACAATCGG AAGGGATAGA TATTGACTTC
GCCAAGAATG AAGGTGGTGG TTACCAGGTA GGATGGAACT CTACCGGCGA ATGGATGAAC
TATACTGTCA ATGTAAAAGA AACAGGTTCC TACAACACAT TTATACTCGT CGGTTCTGAA
GGTACGAACG GCATCTTCCA CCTGGAATTT GACGGCAAAG ATGTGACCGG ACAGTTAAAG
GTGCCTAATA CCGGTGGATA CCACAAACGA CAGACTATAG CCACCAGTGT ATTCCTCACC
AAAGGTGTAC ATGTCATGCG CTTTTTTGTT GACCACGATG GCTTCGATGT GAAGTCTGTC
ACTTTCCGGC CTTTAAACTA A
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| Protein sequence | MLNIQQLLAL CICVVLLYGG CKKDSGYYGY QNQLQEFDGT TYDFLKNEHQ YDSFLLAVER
VHLTDTLKNG LYTVFAPTDA SFKQAIENMN TLRTIQGRAH MYINTVPYEQ LDTLVCRYFV
RDTFSSHVMT LQDGLGLTTI RYNYPMHGKF KRTDAEGHVS GGPGVITYSD TKGVIYTNRW
SNATTVALDI VTKNGYVNVL EKDHMFGFDE FIPRMNPTVS SPWNDYPFYI PGVVGLEQYN
RGGNKVAYLD FSLNNQGGQY RPADQVDITT AGEGGLKVGW TETGEWMDYT VEVTQTGEYD
MTLRYGSGGD DGRVHLEMDG RPVVGSSVVM PGSGGYDNFR DITTTVQLTA GRHLMKVYFD
FANFDLRFLK FVIKNAPMPI PGVIALEDYD PGGEGVGYHD TNTRNEGNKY RQSEGIDIDF
AKNEGGGYQV GWNSTGEWMN YTVNVKETGS YNTFILVGSE GTNGIFHLEF DGKDVTGQLK
VPNTGGYHKR QTIATSVFLT KGVHVMRFFV DHDGFDVKSV TFRPLN
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