Gene Cpin_1757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1757 
Symbol 
ID8357907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2131650 
End bp2133155 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content46% 
IMG OID644963944 
Productputative lipoprotein 
Protein accessionYP_003121454 
Protein GI256420801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.866766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACA TATTCAATAG AAAGATATGG CTGCTGATTT TGCCCGTTAC AGCGGTTATT 
TATTTCTCCT GCGCAAACAA CACTGAAAAG AAAACGCCAA CAGCGCAAGC TGATGATGCC
GGCTCCTGCC GATGCAGCGA CAGCGTAAGT ATTCCGTTCA ATAACAATGT TCCCGGAGAT
CTTCCTGCGG GATTGTTTAC TAACCAGGTA AATGCCAATT GTTTCGGCTG GTGGGAATTC
GTCACATTAA ACTGGCCTAC ACAAGGCGAC TTTTTCGGTC AACCTGGCAG TACTGCTCCG
GTACAATGGG AGAACTATAT CACTTCAGAA GAGTTATATC CGTCTGATGG TGCTGCTCCC
CGCCCCTGGA CACAGCTAAG GGAACACTTA AATCTGCCGA AAGACGCACT GGCTAAGGAC
GAACGTATGA AGGAAGCTAC GCTCCTGCTG AGTATGACCA GTAAATTTGA TGGTTTACCG
ATGTTCCTGG ATAGTATGAA TACGGAAGAA GCACAGCCTC AGTTCAGCCC TGCCTGGCTG
GGTGCACAGA ACGGAACGAA TGTATGGTAC GCCATTCATT TCAACCAGGA TGAGTATAAC
TATATTGTAA ACAATAAATT CTACGATGCT TATAAGCAAC ATGAAGCGGT GAATAAAGGC
GTACCTATCG TATTCCCGTC CGGCGCCTAT AACGGCCCTA CCGGTGCAGT AGAAGTAAAA
TCTGCCTGGC TGGAAGTGAC TGATCCGGAT AATCCTAAGT GGAAAACCTA TAAATTATCC
AAAGCAGTTG TAGAAGATAT TAAAACAGGC ACTTACCGTT ATGCACTTGT AGCACTTGTC
GGATTACATA TTCTCCAGAA AACCACTTCT CAGCCACAAT GGGTGTGGAC AACTTTTGAA
CATGAAGCGA ATGCGCCGGA TATGAATCAG GCGGATACGA CTTCCATTGC GTACAATTTC
TATAGTCCTG ATTACAAGCC GCCCACCGTC AAAGTGACCA GCGGCTGTAA TAATAAAGAT
ACCACTGTTA CCTTCTCATC ATTGCCTAAC CAGGCGCCGC CCTACTATCT CTGCCGTGGC
ATGGGTCCTG TTCCTATTCA GGTAAAAAGA CAGTTCCCGA TAGATACATT GGCGAAGCTG
GTGAATAAAA AACTGCATGC GTATATCGAC AAAAACTATG CAGGGTCTAT ATGGTCACAT
TACCACCTGG TCAATGTACT ATGGTCGACC AAAACGCCAC CGCCAAGTAT CCCGGAAAAG
CCGCAGATAC AGCCTTTACA TCCGCTCGGT ATGGCGCCGT CTCCGAAAGA CCAGCCAGTC
GCAAACACTA CGATGGAAAC TTACATTCAG TCGCAAACCT GTACCGGCTG CCACCGGTTC
ACACAGATTG CGCCTATTCC AAGTGATACC AATCCGAAGT TTGCGGCCGA CTATACGTTT
TCGATGTTCA ACGCCAGCTA TCCTGGAAAA AAGATCATTC AGAAAATTGA TAAACAGAAA
AAGTAG
 
Protein sequence
MKYIFNRKIW LLILPVTAVI YFSCANNTEK KTPTAQADDA GSCRCSDSVS IPFNNNVPGD 
LPAGLFTNQV NANCFGWWEF VTLNWPTQGD FFGQPGSTAP VQWENYITSE ELYPSDGAAP
RPWTQLREHL NLPKDALAKD ERMKEATLLL SMTSKFDGLP MFLDSMNTEE AQPQFSPAWL
GAQNGTNVWY AIHFNQDEYN YIVNNKFYDA YKQHEAVNKG VPIVFPSGAY NGPTGAVEVK
SAWLEVTDPD NPKWKTYKLS KAVVEDIKTG TYRYALVALV GLHILQKTTS QPQWVWTTFE
HEANAPDMNQ ADTTSIAYNF YSPDYKPPTV KVTSGCNNKD TTVTFSSLPN QAPPYYLCRG
MGPVPIQVKR QFPIDTLAKL VNKKLHAYID KNYAGSIWSH YHLVNVLWST KTPPPSIPEK
PQIQPLHPLG MAPSPKDQPV ANTTMETYIQ SQTCTGCHRF TQIAPIPSDT NPKFAADYTF
SMFNASYPGK KIIQKIDKQK K