| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1748 |
|---|
| Symbol | |
|---|
| ID | 8357898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2117735 |
|---|
| End bp | 2118613 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644963935 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003121445 |
|---|
| Protein GI | 256420792 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.232189 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCCT GTTGTAACCC GCATCCTATT AAAAACGTTG TTGCCTTGAA GTACTTATCC
TGGACCTTTG TGGTCCTGTT TGTTACCGCG GTTGCTGTAC TGTCCTGGCA ATATTTACAG
GCCAAAGCAC CGCATCCGGT ATCTGCCCCT TACTATAAAA CAGTAGGACA GCTGCCATTG
CCGCCCGGTT TTAAAAGAGA ACCTGTAGCG AAAGGGTCAT TTGGTGAATG GCTCAGGACA
ATTCCTTTAA AAACAGATAA TACGGTATAT CTGTATAACG GACAGAAAAA GGGAAATCAG
ACTGCACAAT ATGCCGTACT GGATATCTCT GTTGGCAAAA AAGATTTACA GCAATGTGCA
GATGCCGTGA TTCGCTTATA TGCAGAGTAT TTATATGCAT CGCACCAGTA TACGAAAATA
GCCTTTCATG CTACGGATGG TACATTGATG GACTACAGCA GCTGGATGAA AGGATATCGC
TATCCTGTAA AACAGGGCCG TTTACAGAAG CAGCTGACGG GTGCGCCTTG TAAGGGAGAT
GCTTGTTTTG CTGATTTTCT GCAGACCGTT TTCTCTTACG CCGGCACTTT ATCGCTCAGT
AAAGAATTGA ATGTTGTGAA TAATCCTGCT GCCATCAATA TCGGTGATGT GTTTATCCGT
GGAGGTTCTC CTGGTCACGC TGTGATCGTA ATGGATATGG GTGTCAATAA CGCGGGACAG
AAGACTTTTT TGCTGGCACA GAGTTATATG CCCGCACAGG ATATTCACAT ACTGCAAAAT
CCAACCAGGA ATCAAGATCC CTGGTACCAA TATAACGGCG GAAAAATATT AAGCACACCC
GAATGGATTT TTGACTGGAA CCAGCTAATG AGGTTCTGA
|
|---|
| Protein sequence | MESCCNPHPI KNVVALKYLS WTFVVLFVTA VAVLSWQYLQ AKAPHPVSAP YYKTVGQLPL
PPGFKREPVA KGSFGEWLRT IPLKTDNTVY LYNGQKKGNQ TAQYAVLDIS VGKKDLQQCA
DAVIRLYAEY LYASHQYTKI AFHATDGTLM DYSSWMKGYR YPVKQGRLQK QLTGAPCKGD
ACFADFLQTV FSYAGTLSLS KELNVVNNPA AINIGDVFIR GGSPGHAVIV MDMGVNNAGQ
KTFLLAQSYM PAQDIHILQN PTRNQDPWYQ YNGGKILSTP EWIFDWNQLM RF
|
|---|
| |