Gene Cpin_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1743 
Symbol 
ID8357893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2112109 
End bp2112687 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content47% 
IMG OID644963930 
Producthypothetical protein 
Protein accessionYP_003121440 
Protein GI256420787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGA TGTCATTGTA TGCTTTAATG TTATGCGGTA TTATTTTCTT CGGTGCATGT 
GGTAAAGATG GTGAAACTGG TCCTGCGGGC GCAAAAGGTG ATACCGGTGC AGCTGGTCCT
GCCGGTACGC CTGGTAAAGA TGCCACTTCC GGTATTATCT ATTCTGACTG GCTGGATGTC
ACCTTCACCG CTGTAAAGGA AGAAACAGAT GACAACGGTA ATGGCGTACT CGATACAATC
TTCTTCGGCG CACAGATCGA AGCAGAAAAG ATCACGGACG AGATCCTGTC TACCGGCGAT
GTAAGAGTAT TTATCAATAC TTATTCTGAC GCAGAGAAAG ATATCGCACC TTTGCCATAT
GTGAGTCCGG TGACCGGCGC TACGATCAGC CCGTCTTTTT CCACTGGTCT GATCACACTG
CTGGCAAACG GTCCGTTCAA CACTTTTACA GATGGTACAG CAAAATATCA GCAATACAGA
TATGTAATTA TTCCCGGTGG TGCTGAAGCC CGTAAAGCCG CTGGTATCGA CTGGAATGAC
TACAAACAGG TGAAAGCTTA CCTGCACCTG AAAGACTAA
 
Protein sequence
MRKMSLYALM LCGIIFFGAC GKDGETGPAG AKGDTGAAGP AGTPGKDATS GIIYSDWLDV 
TFTAVKEETD DNGNGVLDTI FFGAQIEAEK ITDEILSTGD VRVFINTYSD AEKDIAPLPY
VSPVTGATIS PSFSTGLITL LANGPFNTFT DGTAKYQQYR YVIIPGGAEA RKAAGIDWND
YKQVKAYLHL KD