Gene Cpin_1737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1737 
Symbol 
ID8357887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2093783 
End bp2095084 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content47% 
IMG OID644963924 
Producthypothetical protein 
Protein accessionYP_003121434 
Protein GI256420781 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000291143 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAAC GCTTACTCCT GATATGTTTT ACCTTTTTCG TACTGGCAGC CTGCCAGAAA 
TCGGATGAAG ACGTATTCAA CGCTCCTCCC GATACCCGCC TGAACGATAC CCTGAAAAAG
TATAACGATA TGCTGGTGGC AGCGCCATAC GGCTGGAAAG GGCTGGTATA TCCTTCCGGT
CTGGAGCATG GAATATTCTC CTTTTACTTT CAGTTCAATG ATTCCAACAG GGTGAAGATG
TATGCGGATT TTGATTCGGC ATCTTCCGTG ACCATGGCAG AAAGCAGCTA TCGCCTGAAG
GCATTGCAGC AACCATGTCT CCTGTTTGAT ACCTACTCCT ATATACACCT GCTGAGCGAT
CCTGACGGAT CCGTAAATGG GGGTGTGTAT GGCGAGGGAC TGTATTCTGA CTTTGAATTT
TCTATCGAAG GAATGAGCGG AGACTCCATT GTACTCAAAG GAAGATATCA TGGCAGCAGA
GCGGTACTGG TAAAAGCAAC AGAAGCAGAG AAGAATGCCT ACAGCGCTGA AAAGAGTAAT
CGCCTGATCG ATAAAATAGG TAGCTACCTC ACTTACTTCA AACGCCTCAC CATTAACAGT
AAAGGATATG ATGTGTCTTT TGATGTTGCC AGCAGAACCA TTACAATCAG TTGGGTAGAT
GAAGGGGGCA ATAACCATAC AGCAAGCACT GGTTTCTACT ATACACCTAC CGGTGTAGCA
TTCTCTCCTG CAATCAGTAC AGGTAATGAA ACGCTGACCG GCTTTGACAA TGTTACCTGG
AATGCATCCA CGACTACACT GGGTTTTACC GCCAATGGTA ATACCGGTAC AATCAAAGAA
ACTGCTAAAC CGCTGGTAAT AGATAAAGAG GCTGCTAAGA GCTGGTGGCA ACAGCAGGTA
GACGCAGGTA GCTACTGGGT AACCGTAGAT GGATTTCACG TAGACGGTAT TGACGATGCC
TATGGCATTC AGCAATTGCC TAACTATTCC TTTGTTGTAT TCTATCCGAA ATTCGGCACA
AGCGATAATA CAGTGTATGA CCTCTTAGGT TTTGTAACCC GCACTGAGGC CGGACAATAC
ATCGAATACG GGCCTGCATT CAGCGCGCCG ACTTTCAAGA CAGACGGCCG CATCATATTC
CCGTACCTGG GCATACTCGG AGAACTGCCG GATGGAGAGA CTGCTGTCTC CAACACCATT
ACGAAGATCA CAGACTCCAA CGGATTCTAC CTGGTAAAAA CGAACAGCGG TTACGATATG
GTAAGCGCTA AAGACGGAAA ATCCTGGATA TCCTGGTTTT AA
 
Protein sequence
MYKRLLLICF TFFVLAACQK SDEDVFNAPP DTRLNDTLKK YNDMLVAAPY GWKGLVYPSG 
LEHGIFSFYF QFNDSNRVKM YADFDSASSV TMAESSYRLK ALQQPCLLFD TYSYIHLLSD
PDGSVNGGVY GEGLYSDFEF SIEGMSGDSI VLKGRYHGSR AVLVKATEAE KNAYSAEKSN
RLIDKIGSYL TYFKRLTINS KGYDVSFDVA SRTITISWVD EGGNNHTAST GFYYTPTGVA
FSPAISTGNE TLTGFDNVTW NASTTTLGFT ANGNTGTIKE TAKPLVIDKE AAKSWWQQQV
DAGSYWVTVD GFHVDGIDDA YGIQQLPNYS FVVFYPKFGT SDNTVYDLLG FVTRTEAGQY
IEYGPAFSAP TFKTDGRIIF PYLGILGELP DGETAVSNTI TKITDSNGFY LVKTNSGYDM
VSAKDGKSWI SWF