| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1728 |
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| Symbol | |
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| ID | 8357878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2078453 |
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| End bp | 2080480 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644963915 |
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| Product | protein of unknown function DUF1680 |
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| Protein accession | YP_003121425 |
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| Protein GI | 256420772 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3533] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.670849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTGTT GTGCACTTCC AGTGGTTTTC ATGTTACCAC TGGTGGCACA AGCCGGCATC
AAACAGGTCT CACCCGGCGC CTACACTCCT CCCGCGTACG AAGCGTTACG CCTGGGTAAT
GTTAAACCCA CGGGCTGGCT CAAACGTCAG CTGCAGATTA TGCGTAAGGG ATCATCCGGT
CATCTGGATG AATATTACAG CAAGATTAAA AACGATAACG GCTGGCTCGG TGGCCGTGGC
GACGGCTGGG AGGAAACTCC TTACTGGCTG GACGGCGCAT TGCCACTCGC TTATCTGCTG
GATGACGCCG TACTGAAAGA TAAGGTGCTC CGTTATGTTA ACTGGACAAT GGACCACCAG
CGTAAAAGCG GTTATTTTGG TCCGCTGACC AATGCTGAAA TTACCCGACA GGTGGATATC
GATGCGGCGC ATGCCGCAGA AGGAGAGGAC TGGTGGCCTA AAATGGTCAT GCTGAAAGTA
TTACAGCAGT ATTACTCCGC TACAGAAGAC AAACGCGTGA TCAAATTCAT GTCCAGGTAT
TTCCGTTATC AGCTGGAAGC ACTGAAAGTA GCCCCGGTAG GTAAATGGAC AGAATGGGCG
CAATCCCGCG GAGCTGAAAA TGTGATGATG GCCCAATGGC TGTATAGCAT TACTGAAGAT
GATTACCTGC TGGAACTGGC GGAGACGATC GAACAACAGT CCTTTCCCTG GACAACCTGG
TTTGGTAACA GGGATTGGGT GATCAATACC ACTACCTATC GGAACAACAC CCAATGGATG
AACAGACACG CCGTGAATGT CGCCATGGGG TTAAAAGCGC CCGCAGTTAA TTACCAGCGC
ACCGGTAAAC AGGAATACCT GCAGCACCTC CGTACAGGCT GGCAGGACCT GATGACTATT
CACGGTCTGC CCATGGGTAT CTTTTCCGGA GATGAAGATC TCAATGGAAA TGATCCTACT
CAGGGAGTAG AGCTATGCGC CATCGTTGAA GCCATGTATT CCCTGGAAAA TATCAGTGCA
ATCACAGGAG ATGTGTTCTA TATGGATGCA CTTGAAAAGA TGGCCTTTAA TGCCTTGCCT
ACCCAGACGA CGGACGACTA CAACGAGAAA CAGTATTTCC AGGTCGCTAA TCAGTTGCAG
ATCAGCAAAG GGGTATTCAA CTTCTCATTG CCTTTCGATC GCGAAATGTG CAACGTATTA
GGCGCCCGCA GCGGTTATAC CTGTTGCCTG GCCAATATGC ACCAGGGCTG GACCAAATAC
ACTTCTCACC TCTGGTATCA GACCTCCGGT AAAGGTGTGG CAGCACTGGA ATATGGTCCC
TGTGTCATGA CAGCAGAAGT AGGAAAGAAG CATAGAGATG TAACCATCAC AGAAGTCACC
GATTATCCTT TTAATGAAGA AATCCGGTTT CAGATCGCTA TAAAGAAAGA AACGGAGTTC
CCGTTACAGC TGCGTATACC TGCCTGGTGT AATGAAGCCG TGATCTTACT CAATGGCCAG
CCTTTACGAA AAGACAAAGG AGGCCAGATC ATCACTATCG AACGTGAATG GCAGGATAAA
GACGAACTGA CGTTGCAATT GCCCATGACC ATTACAACCG GTACCTGGGG ACGTAACGCC
AGTGCAGTGG AAAGAGGTCC GCTGGTATAT GCCTTAAAAC TGGAAGAACG CTGGGTAAAA
GACGCCGATC CGACAGAAGG GGCTTACTAT AGTGTATATC CTACCGGCGA CTGGAACTTT
GCATTGCGCC GCAATGATAT CCGCCATGCT GCTGACAGCA TGAAAGTGAC AAAACAGCGT
CCGCTGGATT CCAGTTTCGT ATGGAACCTT AAACATGCGC CACTGGAAAT AACCGCAAAG
GCCAAAAAGA TCCCATCCTG GCAGGTAATG AACGGAGTAG CTTATCAGCC TCCAACCGAC
AGGGAAGGGT TCTATAAAGG GAAGGTAGAT ACCGTTATGC ACAACATCAC ATTAGTGCCC
TATGGTTTTA CGAAAGTGAG AGTTGTTGCA TTCCCTGTTG TACCATAA
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| Protein sequence | MVCCALPVVF MLPLVAQAGI KQVSPGAYTP PAYEALRLGN VKPTGWLKRQ LQIMRKGSSG
HLDEYYSKIK NDNGWLGGRG DGWEETPYWL DGALPLAYLL DDAVLKDKVL RYVNWTMDHQ
RKSGYFGPLT NAEITRQVDI DAAHAAEGED WWPKMVMLKV LQQYYSATED KRVIKFMSRY
FRYQLEALKV APVGKWTEWA QSRGAENVMM AQWLYSITED DYLLELAETI EQQSFPWTTW
FGNRDWVINT TTYRNNTQWM NRHAVNVAMG LKAPAVNYQR TGKQEYLQHL RTGWQDLMTI
HGLPMGIFSG DEDLNGNDPT QGVELCAIVE AMYSLENISA ITGDVFYMDA LEKMAFNALP
TQTTDDYNEK QYFQVANQLQ ISKGVFNFSL PFDREMCNVL GARSGYTCCL ANMHQGWTKY
TSHLWYQTSG KGVAALEYGP CVMTAEVGKK HRDVTITEVT DYPFNEEIRF QIAIKKETEF
PLQLRIPAWC NEAVILLNGQ PLRKDKGGQI ITIEREWQDK DELTLQLPMT ITTGTWGRNA
SAVERGPLVY ALKLEERWVK DADPTEGAYY SVYPTGDWNF ALRRNDIRHA ADSMKVTKQR
PLDSSFVWNL KHAPLEITAK AKKIPSWQVM NGVAYQPPTD REGFYKGKVD TVMHNITLVP
YGFTKVRVVA FPVVP
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