Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1726 |
Symbol | |
ID | 8357876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2076002 |
End bp | 2077450 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644963913 |
Product | hypothetical protein |
Protein accession | YP_003121423 |
Protein GI | 256420770 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATATAC TGCTTACAGG CGCAAATGGC TACATAGGTC AACGATTAAT TCCGGTATTA CTGGAACAGG GTCATCACAT TACCTGTTGT GTAAGAGATA AGGACAGGTT TAACCAGCAG CATAACTATC CGGTAGATGT TATTGAGATT GACTTTCTGC AACCACAGGC GGCCACCTTT CCCCGCGATA TTGACGTAGC CTATTACCTG GTACACTCCA TGAGCAGCGG TGGACAATTT GAGGAAAAAG AAGCGGATTC TGCAAGAACA TTTGTGCGGC TGATCAGTGC TACAAATTGC CAGCAGGTGA TCTATCTGAC CGGAATAGTC AATCAACAGG AGCTTTCCAG GCATCTTAGC TCCCGGTTAA TGGTGGAGAA TATCCTGAAA GAAGGGCCTG TTCCGCTGAC AGCATTAAGG GCAGGTATTA TTGTTGGCTC GGGAAGCGCC TCTTTTGAGA TCATCCGGGA CCTGGTAGAG AAATTGCCCG TCATGGTCAC ACCGCGATGG CTGAACACCC GTTGTCAGCC TATCGGTATC AGAGACGTCA TTTTCTTTTT ATGTGGTGTA TTGGGGAAAA AGGACACCTA TCACGCTAAT TATGACATAG CGGGTCCGGA AGTACTTACT TATAAACAGC TATTACTGCA ATATGCAGCG GTCAGGAAGC TGAAAAGATA TATTCTTACC CTACCTGTTA TGACGCCCCG GCTCTCTTCT TACTGGCTTT ATTTCATTAC ATCTACCTCT TACAAACTTG CAGTCAATCT TGTTGACAGC ATGAAAGTGG ATGTAACAGC GAGGCCGAAC CAACTTGCTG CAGATCTGGG CATACATTTA CTCACTTACG AACAGGCTGT TGAGCTGGCA TTTGGCAAAA TAGAGCAGAA TCTTGTGACA AGCAGCTGGA AAGATTCTTT TTCATCAGCT AACACACCTC AGACGTGGAT GGATAACATT GAAGTGCCCA GTTTTGGTTG CCTGAAAGAT GAGCAGCAGA TTACCATTGA ACAGGATGAC ACACTTGTCC TTAATAATAT CTGGAGGATA GGAGGCAATA ACGGCTGGTA CTATGCAAAC ACGCTGTGGC GGATACGTGG TTTTCTCGAT AAACTTGCAG GAGGTGTAGG GCTGCGCAGA GGCAGACGGG ATCCCATAGA TATACATGCG GGCGACGCCC TTGATTTCTG GCGGGTGCTG GTTGCAGATA AGAAACAACG AAGACTTTTA TTATTTGCGG AAATGAAGCT TCCTGGAGAG GCCTGGCTGG AATTTCAGAT AACGGAAAAA GACAATCAGT CTATACTAAG ACAAACTGCT ACATTTCGCC CCCGAGGCTT ATGGGGCAGA CTCTACTGGT TTACAATGCT TCCTTTCCAT TACTTTATTT TCGGAGGAAT GATCCGCCGG CTATCAAATG GAATTTTGGG TAAGACAAAA AAAATGTAA
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Protein sequence | MNILLTGANG YIGQRLIPVL LEQGHHITCC VRDKDRFNQQ HNYPVDVIEI DFLQPQAATF PRDIDVAYYL VHSMSSGGQF EEKEADSART FVRLISATNC QQVIYLTGIV NQQELSRHLS SRLMVENILK EGPVPLTALR AGIIVGSGSA SFEIIRDLVE KLPVMVTPRW LNTRCQPIGI RDVIFFLCGV LGKKDTYHAN YDIAGPEVLT YKQLLLQYAA VRKLKRYILT LPVMTPRLSS YWLYFITSTS YKLAVNLVDS MKVDVTARPN QLAADLGIHL LTYEQAVELA FGKIEQNLVT SSWKDSFSSA NTPQTWMDNI EVPSFGCLKD EQQITIEQDD TLVLNNIWRI GGNNGWYYAN TLWRIRGFLD KLAGGVGLRR GRRDPIDIHA GDALDFWRVL VADKKQRRLL LFAEMKLPGE AWLEFQITEK DNQSILRQTA TFRPRGLWGR LYWFTMLPFH YFIFGGMIRR LSNGILGKTK KM
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