Gene Cpin_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1725 
Symbol 
ID8357875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2075164 
End bp2075970 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content45% 
IMG OID644963912 
ProductIntegral membrane protein TerC 
Protein accessionYP_003121422 
Protein GI256420769 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATA TTTTTTCCGC TGAGGGCCTG TTTACTATAG ACTCGCTGAT CAGCCTTTTG 
ACTTTAAGCG TACTTGAAAT TGTACTGGGC ATTGACAACA TTGTTTTCAT TTCTATCCTG
GCAGGCAAAC TTCCTGCAGA AAAACAGAAA AAAGCACGTC GTCTTGGTCT GACACTGGCG
ATGTTTGTGC GCATCCTGCT GTTATTGTCT ATCAGCTGGA TCATGTCTCT CACCACCCCT
CTTTTTAATG CCGGCGAATG GATAGGTATT CATTCCGAAA AATGGCTGGA AGCAACGGCT
ATTTCCGGCA GGGATCTTAT CCTGTTGATA GGCGGCCTGT TCCTGATCTA TAAAAGCACT
GCGGAGATCC ATGAAAAGCT GGAGGGAGGA GAACACAGCT CCGGACCAGT TAAACCTGCG
AGTTTTACCC GTACGATCAT CCAGATCCTG CTGCTGGATA TTGTATTTTC CCTTGATTCT
GTGATCACGG CGGTGGGTAT GGCCGATCAT ATCCAGATCA TGATCGTTGC GGTTATTATT
GCTGTAGGCG TCATGGTGGT AGCGGCGGAA GGCATCAGTA ATTTTGTGAA TAAACACCCT
ACGGTGAAAA TGCTGGCGCT TTCGTTCCTC TTACTGATCG GTGTTTCACT GATCGCAGAA
AGCTTTGAGC AGCATATCCC TAAAGGGTAT ATCTATTTTG CCATGGCATT CTCTGTATTT
ATTGAGATGC TGAATCTGAA GATGAAATCA AAAAGTACAA AACCTGTACA GTTGCATCAG
CCAAGGCTGA AAGACAGCGA TCAGTAG
 
Protein sequence
MENIFSAEGL FTIDSLISLL TLSVLEIVLG IDNIVFISIL AGKLPAEKQK KARRLGLTLA 
MFVRILLLLS ISWIMSLTTP LFNAGEWIGI HSEKWLEATA ISGRDLILLI GGLFLIYKST
AEIHEKLEGG EHSSGPVKPA SFTRTIIQIL LLDIVFSLDS VITAVGMADH IQIMIVAVII
AVGVMVVAAE GISNFVNKHP TVKMLALSFL LLIGVSLIAE SFEQHIPKGY IYFAMAFSVF
IEMLNLKMKS KSTKPVQLHQ PRLKDSDQ