Gene Cpin_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1723 
Symbol 
ID8357873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2073988 
End bp2074383 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content46% 
IMG OID644963910 
Productthioesterase superfamily protein 
Protein accessionYP_003121420 
Protein GI256420767 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCT ATACACGTAA ATGGGTAAAA CCTGAAGACC TGAATGCACA CGGAACTTTA 
TTTGGAGGCA GTCTGCTGCG TTGGATAGAC GAAGAGGCAG CTATTTACAG TATCATTCAG
CTGGGTACCA ACAGATGTGT AACAAAATAC ATGTCGGAGA TCAACTTCGT AAGCTCAGCC
AAACAGGGCG ATATTGTAGA GCTGGGGATA AAGGCGACTC ATTTTGGCAG AACTTCCCTG
ACATTGGCCT GCCAGGTCAG GAATAAGATC ACACAGAAAG TGATTCTGAC TGTGGATAAA
ATGGTATTTG TCAGCGTAGA TGAAAACGGT ACGCCATGGC CGCACGGTCG TACGAAGATC
ACCTATACAG ATGAGCGCCT GCGCGAAGAT GAATAG
 
Protein sequence
MNFYTRKWVK PEDLNAHGTL FGGSLLRWID EEAAIYSIIQ LGTNRCVTKY MSEINFVSSA 
KQGDIVELGI KATHFGRTSL TLACQVRNKI TQKVILTVDK MVFVSVDENG TPWPHGRTKI
TYTDERLRED E