| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1720 |
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| Symbol | |
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| ID | 8357869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2071272 |
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| End bp | 2071790 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644963906 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003121417 |
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| Protein GI | 256420764 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATA ACCCATCCAG GATACTCTTT GGTCAATTAT TTGAAGCCAA CAGGGAAAAG
GTGTACCGGT TCGCATTCAA ACTTACCGAC GACCGGCAAC GGGCGGAGGA AGTGACACAA
CAATGTTTCA TCAAACTATG GGAAAACATC CATAAGGTGC ATAAAGACCA GGATGTATTC
CCCCTCCTAT TCGTATTTGT AAAACATATT GTGATTGATG AAACGAGAAA ACTATACCGT
GAGAGAAAAT CATTATCACA ACTGTCATCC AACCAGGTCT CTTCTGACAG GGGGGATGAA
GATACGCTGA TGCGCAAAGA ATTCACTGAA CAGGTTCACA AACTGATCGA ACAGATGCCG
GAACAACGCC GGAACATTTA TCTGCTTAGC CGCGACAAAG GGAAAAGTCA CAAAGAGATT
GCAGACCAGT TAAGTCTGTC GCCCACCACC GTAAGAAATC ACCTCAACCT CGCCCTGCAA
TATATCAGGC GGGAAATGAT GGCCCATTAC GATATGTAA
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| Protein sequence | MSDNPSRILF GQLFEANREK VYRFAFKLTD DRQRAEEVTQ QCFIKLWENI HKVHKDQDVF
PLLFVFVKHI VIDETRKLYR ERKSLSQLSS NQVSSDRGDE DTLMRKEFTE QVHKLIEQMP
EQRRNIYLLS RDKGKSHKEI ADQLSLSPTT VRNHLNLALQ YIRREMMAHY DM
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