| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1716 |
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| Symbol | |
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| ID | 8357865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2064274 |
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| End bp | 2067429 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644963902 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003121413 |
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| Protein GI | 256420760 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.854404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGTT GGAAAGCTTT CCTGTTATGT TTTAGTGCAG CGGGTTTCCC TGCTGTACTG
GTGGGACAAT CTTATCAATC ATTAGGGGAT AAAGTGTCTG TGAATCTGCA ACACACAAAT
GCAGCAGCTG TTGTTAAATC GCTTGAACAA CAAACATCTT ATACGTTCGC TTACGATCCG
GATTATCTGG CACATTGTTC ACTGGATGCA GTGAAGTTCA ATGGACAGCC ATTATCGCAG
GTATTAAGTT ACCTGGACGC CTATGCGCCT ATCGATATCG CATTTGCTAA CAATACCGTC
GCCCTGAAAC AAGGGAAGCA GGAAAAGTCT GCTGTGAAAG AGAAAGGACG TGTGAAAGGA
AAGATCGTTG ATAATAAAAA TGAAGCATTA CCGGGTGTAA CTATTCAGGT AGATGGAGGA
TCAGGAGTAG TGTCCAATGT TGATGGTTCT TATGAACTGA ACCTGACGCC TGGTACTTAT
ACTGTTACAT TCAGCTTTGT GTCCTACGAT ACGCGTAAGG TAACAGAGGT GATCGTAAAA
GAAGGTGATA TCACCCCATT GGATATCATT CTTAAAAGTA GTAGTTCCCG CCTGAAAGAG
GTGACTGTTA CCGGAACTTA TAAACGCGCA TCTGTAGAAG GCTTATATGC TATACAGAAA
AATAACGCCG CCATCACTGA TGGTATCAGT TCTGAGCAGA TCAGCCGTAC GCCGGATAAG
AACATCGGCG AAGTATTGAA ACGTGTAACT GGTCTCTCTA CTGTAGATAA TAAATATGTT
GTTGTTCGCG GATTAAGTGA ACGTTATAAT CAGGCTGTAT TGAATGGCCA GATTATGCCA
AGCACAGAGT TGAACAGAAA GAACTTCAGC TTTGATATCG TGCCCGCCAA TATTGTGGAA
AATGTGGTGG TAGTGAAAAC ATTAACACCC GATCGTAGTG CAGAATTTGG TGGTGGTCTG
GTAGAGGTGA ATACACTTGA TATGCCTACA CAGAATTTTC TGAATATAGG TGTTGGTGGT
AGTGTGAATA ACCTGACTAC CGGTGAGAAT TTCCGCACAC TAAAACTGGA AGGAAAAGAA
TACTGGGGAA AAGCTGCTGA TCATCGCAAT CTGCTGGGTC AAACCAAATG GAATAATACA
ACAGACATCA TCAATAAATT TGACGCCAGC AATAAGGATT TTAAACAATT CAGCAATAAC
TGGGGTGTAT ATGAAATGAA AGCACCAGTT TCCCAGAACT ATCAGTTGTC AGGTGGAAAA
GTAATGAAGC TTTCAGGTTC GAAACAACTG GGTATTGTTG CTTCAGCCAG TTACAGAAAC
ACTTTTCAGA CACAGGACAT CGTCATGACC AGAGATGGTT TTGATAATGG ATTCACCGGA
AAACGCTATG GTTTTACAAC CAACCTGGGT GGATTACTGG GTGTAGGTTA CAGAAGTGAG
CGGACTAAAC TGAGTTTACA AAGTTTATAC ATCCGTACAC TGGACCAGCA GTTGCTGATA
GGTGTTGGTG ATCACGTTGA TCCTAGTGGA CACATGTTAG GTTACTATGA TCTGACTAAT
CAGACCTCTC TCTGGCAAAC GCAGTTCAAA GGTGAACAGG CATTGGGAAA ACATGGTGTC
AAATTAAAAT GGCTGGGAAG TTATGTTTCT CTTGACAAAT CAAGACCAGA CAATCACCAG
CTGTTAGCTG AAACAATCAC AGATTCAAAG TTGCCTTCCA ATGAATTCAA TGTAAGAGCG
CCTATCAGTA GTGGTATCAG TGAAGGTGTA CTCCGGTGGT GGAGTCGTGC ATATGAAAAG
GATTATAACT GGGATATATC AGTATCGGCA CCATTTAAAT TGGGTACAGG AAACTTCCAG
ACGGACAATA CATTTAAAGC CGGATATGCA GGATGGAGTA AAAACAGATT GTTCTATGTA
TTGAACACCG GTACCAAAGG ATTTAAAACA GATGATTTTC CACCATTGTC TGAAGCGTTC
TCACCTGAAA GAGCTGGTGA AATTTACATG GGCCGCTTCG GAGATGATTT TCATAAAACA
GCCGCACTGC ATAGTATGTA TGCAATGCTG GACAATAAGA TCAACGAAAA ATGGAGATTG
GTGTGGGGGG TAAGAGCAGA GTATTTTAAC CTCAATGGCA TCAACGGTGT ACTTGATTCT
GTGTTCAGAG AGATCAATGC TTCAAGACCT GGCGCACAAC TGGACTATAG CTCACTGACA
AACCGCGAAC CAAACTGGCA TTTGTTCCCT TCAGCGAATC TGACCTATAG CCTGACTCCA
GCAATGAATC TGCGCTTGTC CTATGCGAAA AGCATTATTC GTCCTGACCT GAGAGAACTG
TCCTTCTTCC GCGAATATGA CTTTGAGCTG GGTGGCGCAT ATGAAAGTGC ATTGGTAAAA
TCAACAACCG TACAGCATTT TGATTTTCGT TACGAATGGT ATCCTGGTCC TGGTGAAATC
ATTTCCGTAT CTCTTTTCTA CAAGAATTTC AGAGATCCGA TGGAAATCTA CAAACAGGGA
GATATCAGGT TATACCATCT GAAGAATAAT AAAACTGCCA AAAACTATGG ACTGGAAATA
GAGGTAAGAA AAAACCTGGC ATTTACACAG GTACCAGTGA TTAAAAACAT CACGCTATAT
GGAAACTTTA CAGCACTGGA TGCACGTGTT ACACCGCTGG ATATAGATTT CAACAGACTG
GATCCAAACA ATCCAAATAA GGTACTGCCT ACGGAAGCTG TCAGAAGAGA AGAGAAAAGA
CCACAGACGG GAGCAAGCAA CTACATGGTG AATGCAGGAT TCTATTATGA TGTAAAACCG
GCTTCGTTCA GTCTCGTATA CAATTATGTG AGTAACAGAA TGTTCAGACC TGCGCAGTAC
TACAGTGAGT CATTGTTTGA ACGCCCGCTG GAAGCACTGG ATGCACAGCT GGGAATTAAA
CTGCTGAAAC AGAAAATGCT GTTGCGCCTG AATGTTTCGA ATCTGTTAAA TAGCTACTCC
ATCGTATATC GCAACTTTTA TAAAGACGAA GCCATCAGCA ACTATAAAAA AGACCCCGGC
ATTAAAGACC TGCTTTATCA GAAAGACACA GACCGTATAG ATTATCAGGC TAAGCCAGGC
AGGACTTTCA GTGCAACCTT GACATATAAT TTTTAA
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| Protein sequence | MHSWKAFLLC FSAAGFPAVL VGQSYQSLGD KVSVNLQHTN AAAVVKSLEQ QTSYTFAYDP
DYLAHCSLDA VKFNGQPLSQ VLSYLDAYAP IDIAFANNTV ALKQGKQEKS AVKEKGRVKG
KIVDNKNEAL PGVTIQVDGG SGVVSNVDGS YELNLTPGTY TVTFSFVSYD TRKVTEVIVK
EGDITPLDII LKSSSSRLKE VTVTGTYKRA SVEGLYAIQK NNAAITDGIS SEQISRTPDK
NIGEVLKRVT GLSTVDNKYV VVRGLSERYN QAVLNGQIMP STELNRKNFS FDIVPANIVE
NVVVVKTLTP DRSAEFGGGL VEVNTLDMPT QNFLNIGVGG SVNNLTTGEN FRTLKLEGKE
YWGKAADHRN LLGQTKWNNT TDIINKFDAS NKDFKQFSNN WGVYEMKAPV SQNYQLSGGK
VMKLSGSKQL GIVASASYRN TFQTQDIVMT RDGFDNGFTG KRYGFTTNLG GLLGVGYRSE
RTKLSLQSLY IRTLDQQLLI GVGDHVDPSG HMLGYYDLTN QTSLWQTQFK GEQALGKHGV
KLKWLGSYVS LDKSRPDNHQ LLAETITDSK LPSNEFNVRA PISSGISEGV LRWWSRAYEK
DYNWDISVSA PFKLGTGNFQ TDNTFKAGYA GWSKNRLFYV LNTGTKGFKT DDFPPLSEAF
SPERAGEIYM GRFGDDFHKT AALHSMYAML DNKINEKWRL VWGVRAEYFN LNGINGVLDS
VFREINASRP GAQLDYSSLT NREPNWHLFP SANLTYSLTP AMNLRLSYAK SIIRPDLREL
SFFREYDFEL GGAYESALVK STTVQHFDFR YEWYPGPGEI ISVSLFYKNF RDPMEIYKQG
DIRLYHLKNN KTAKNYGLEI EVRKNLAFTQ VPVIKNITLY GNFTALDARV TPLDIDFNRL
DPNNPNKVLP TEAVRREEKR PQTGASNYMV NAGFYYDVKP ASFSLVYNYV SNRMFRPAQY
YSESLFERPL EALDAQLGIK LLKQKMLLRL NVSNLLNSYS IVYRNFYKDE AISNYKKDPG
IKDLLYQKDT DRIDYQAKPG RTFSATLTYN F
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