Gene Cpin_1706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1706 
Symbol 
ID8357855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2048636 
End bp2049079 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content48% 
IMG OID644963892 
Productribosomal protein L11 
Protein accessionYP_003121403 
Protein GI256420750 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID[TIGR01632] 50S ribosomal protein L11 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0216759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG AGATCGCTAC GTACGTGAAA TTGCAGGTAA AGGGTGGCGC GGCCAACCCG 
GCTCCTCCAA TTGGTCCAGC GCTGGGTTCC AAAGGTGTGA ACATCATGGA GTTCTGTAAG
CAGTTCAATG CCCGTACTCA GGATAAAATG GGTAAGGTAT TGCCTGTGTT GCTGACAGTT
TACACTGACA AATCATTTGA TTTCGTAATC AAGACGCCTC CTGCTGCTGT ACAGCTGCTG
GAAGCTGCCA AATTGCAGAG TGGTTCTAAA GAACCTAACC GTAACAAGGT GGGTAAAGTT
ACCTGGGCAC AGGTAGAAGC AATCGCGACA GACAAGATGC CTGACCTGAA CTGCTTCACC
AAAGAAAGCG CTATGAAAAT GGTCGCTGGT ACTGCCCGTT CTATGGGTAT TACTGTTGAA
GGTAACGCTC CTTGGAGTAA CTAA
 
Protein sequence
MAKEIATYVK LQVKGGAANP APPIGPALGS KGVNIMEFCK QFNARTQDKM GKVLPVLLTV 
YTDKSFDFVI KTPPAAVQLL EAAKLQSGSK EPNRNKVGKV TWAQVEAIAT DKMPDLNCFT
KESAMKMVAG TARSMGITVE GNAPWSN