| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1698 |
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| Symbol | |
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| ID | 8357841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2041736 |
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| End bp | 2042680 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644963878 |
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| Product | integrase family protein |
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| Protein accession | YP_003121395 |
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| Protein GI | 256420742 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.23599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTGAAG TCTTACACCC GGTAGCCAAT CAATTTCTGG CTTATATTCA ACTGGAGAAG
CGCTATTCTG CGCATACTTT CACTGCATAT CAGCAGGATC TTACACAATT CTTTATTTTT
CTCAGATCAC AATATGGCGA TGTGTCCCTA CAGGGCATAT CGCATTTGCA TGTCCGTACC
TGGCTGGCCT GGCTGATGGA GGAGGGCATT GTTGCTAAAA GTGTTAACCG CAAGATCTCC
ACGCTCAAAT CTTTTTTCAA ATATGCGATG CGTCATGGTG TAGTAGTGAC TTCACCGATG
ACGAAAGTGA CTGCGCCCAA AACGGGGAAG CGGTTGCCCG GGTTTATTGA TGAAAAGGGG
ATGGAAGCGG TAGAGGACAA CCGGAGTATG CGCCGTGGGC AGGAGGGCAG GCCGATTTTT
GCGGATGACC TGGAGGGCAA GACGCACCGG TTGATATTTG AATTATTATA TCATACCGGC
ATACGTTTAT CGGAGCTGAT CGGTTTACAG GAGCGGCATG TTGATATCTC CAATCTGACA
TTGAAAGTGT TGGGAAAAGG GAATAAGGAG CGTATTATTC CCATCAGTAA AAATCTGCGG
GACGAAATAA AGGGATACCG GGTCATGCGC GATAAAGCGC TGGAGATGCC CGATAAGGAG
GTTTTGCTGG TGAATCCCCG TAGCGGAAAG AAGTTATACC CCCGTTATGT ATATAACGTT
GTGAAAGGTT ACCTCACTGA TCACGAGATT ACGACGATCA GTCGCAGGAG TCCGCATATA
CTGCGGCATA CATTTGCCAC CCATCTTACG AACAATGGTG CAGACCTGAA TGCAGTGAAG
GAGTTGCTGG GGCATGCCAG TCTGGCGTCC ACGCAGGTGT ATACGCATAA CAGTATTGAG
AAGCTGAAGG ACGCGTACAG GAAAGCGCAT CCTAAGGGAG AGTAG
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| Protein sequence | MSEVLHPVAN QFLAYIQLEK RYSAHTFTAY QQDLTQFFIF LRSQYGDVSL QGISHLHVRT
WLAWLMEEGI VAKSVNRKIS TLKSFFKYAM RHGVVVTSPM TKVTAPKTGK RLPGFIDEKG
MEAVEDNRSM RRGQEGRPIF ADDLEGKTHR LIFELLYHTG IRLSELIGLQ ERHVDISNLT
LKVLGKGNKE RIIPISKNLR DEIKGYRVMR DKALEMPDKE VLLVNPRSGK KLYPRYVYNV
VKGYLTDHEI TTISRRSPHI LRHTFATHLT NNGADLNAVK ELLGHASLAS TQVYTHNSIE
KLKDAYRKAH PKGE
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