Gene Cpin_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1696 
Symbol 
ID8357839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2040753 
End bp2041343 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content51% 
IMG OID644963876 
Productriboflavin synthase, alpha subunit 
Protein accessionYP_003121393 
Protein GI256420740 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.375182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACAG GAATAATAGA ATCATTAGGA GAAGTAATAG CTACCAGGCA GGAAGGCAGC 
AATATGGTCA TCACCATCCG CTCTTCCCTC GCACCTGAAC TGAAAATTGA CCAGAGTGTC
GCCCATAACG GTGTTTGCCT GACCGTCACC CGTGTCGACA ACGAGTCCTA CGACATCGTC
GCCGTGGCCG AAACGCTGAT TAAAAGTAAT ATCGGGCAAC TGACCCCCGG CCAGAAAGTC
AACCTCGAAA GAGCCATGAT CTTCAACGGC CGGATTGACG GACACCTCGT ACAGGGCCAC
GTCGACAGCA CCGGCGAATG CGTGTCCGTA ACGCCACAGA ACGGCAGCTG GGAATTCCGC
TTCCGCTACC CGGAACAGTT CGCCGGCCTG ATCGTTGAAA AAGGCTCCAT CTGCCTCAAC
GGTATCAGTC TGACCATATA TAATGTAACC AATACGGAAT TCACCATCGC CGTGATTCCT
TACACATACG AACACACAAA TATCTCAGCC GTTCAACCCG GGAATACCAT TAACCTGGAA
TTTGATATCC TGGGTAAGTT CGTGGCCAGG CAGCTTGCCG TCAGATCATA G
 
Protein sequence
MFTGIIESLG EVIATRQEGS NMVITIRSSL APELKIDQSV AHNGVCLTVT RVDNESYDIV 
AVAETLIKSN IGQLTPGQKV NLERAMIFNG RIDGHLVQGH VDSTGECVSV TPQNGSWEFR
FRYPEQFAGL IVEKGSICLN GISLTIYNVT NTEFTIAVIP YTYEHTNISA VQPGNTINLE
FDILGKFVAR QLAVRS