Gene Cpin_1692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1692 
Symbol 
ID8357835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2037329 
End bp2037931 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content47% 
IMG OID644963872 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_003121389 
Protein GI256420736 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TATTGAAAGT TGTATCCAGT GTGAGTGGCG CTGCGTCAAA GAGTACACAG 
CTGGCAGATG GAATTATTGC TCAGTTACAG GAACGTTATC CGGGCAGCAC AGTGACTGTA
AAAGATCTTG CAAAAGATCC TTTAGGTCAT TTTGATGCAT CTCACCTGTT GGCATTCCGT
GGCGCAGGAG ATGCGACAGC AGAAGCAGCA GCGATTGCTG ATAAGTTATC AGAAGCGGCT
ATTAAGGAGG TGGAAGAAGC GGATATCATC ATTTTGGGAG TAGCGCTGTA TAATTTCCAT
ATTCCGTCTA CGCTGAAAGC GTGGCTGGAT CACGTCGTAC GTGCCGGCAG AACTTTCTCT
TATGCCACCG GTAAACCGGA AGGTCTGTTA AAGGATAAAA AAGTATATAT CGCGCTGGCT
TCAGGTGGTG TTTACTCCGA AGGACCTGCA CAGGCATTTG ATTTTGCTTC TCCATATCTC
CTGGGTATGC TGGGCTTCAT TGGTCTGACA GACGTACAGC TGGTGAGAGC AGAAGGTTGC
AGCATTCCTG GTTTACAGGA TACAGCAGTA CAGAAAGGAT TGGAGCAGGT TGTTATTGCA
TAA
 
Protein sequence
MKKILKVVSS VSGAASKSTQ LADGIIAQLQ ERYPGSTVTV KDLAKDPLGH FDASHLLAFR 
GAGDATAEAA AIADKLSEAA IKEVEEADII ILGVALYNFH IPSTLKAWLD HVVRAGRTFS
YATGKPEGLL KDKKVYIALA SGGVYSEGPA QAFDFASPYL LGMLGFIGLT DVQLVRAEGC
SIPGLQDTAV QKGLEQVVIA