Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1692 |
Symbol | |
ID | 8357835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2037329 |
End bp | 2037931 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644963872 |
Product | NAD(P)H dehydrogenase (quinone) |
Protein accession | YP_003121389 |
Protein GI | 256420736 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAGA TATTGAAAGT TGTATCCAGT GTGAGTGGCG CTGCGTCAAA GAGTACACAG CTGGCAGATG GAATTATTGC TCAGTTACAG GAACGTTATC CGGGCAGCAC AGTGACTGTA AAAGATCTTG CAAAAGATCC TTTAGGTCAT TTTGATGCAT CTCACCTGTT GGCATTCCGT GGCGCAGGAG ATGCGACAGC AGAAGCAGCA GCGATTGCTG ATAAGTTATC AGAAGCGGCT ATTAAGGAGG TGGAAGAAGC GGATATCATC ATTTTGGGAG TAGCGCTGTA TAATTTCCAT ATTCCGTCTA CGCTGAAAGC GTGGCTGGAT CACGTCGTAC GTGCCGGCAG AACTTTCTCT TATGCCACCG GTAAACCGGA AGGTCTGTTA AAGGATAAAA AAGTATATAT CGCGCTGGCT TCAGGTGGTG TTTACTCCGA AGGACCTGCA CAGGCATTTG ATTTTGCTTC TCCATATCTC CTGGGTATGC TGGGCTTCAT TGGTCTGACA GACGTACAGC TGGTGAGAGC AGAAGGTTGC AGCATTCCTG GTTTACAGGA TACAGCAGTA CAGAAAGGAT TGGAGCAGGT TGTTATTGCA TAA
|
Protein sequence | MKKILKVVSS VSGAASKSTQ LADGIIAQLQ ERYPGSTVTV KDLAKDPLGH FDASHLLAFR GAGDATAEAA AIADKLSEAA IKEVEEADII ILGVALYNFH IPSTLKAWLD HVVRAGRTFS YATGKPEGLL KDKKVYIALA SGGVYSEGPA QAFDFASPYL LGMLGFIGLT DVQLVRAEGC SIPGLQDTAV QKGLEQVVIA
|
| |