Gene Cpin_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1685 
Symbol 
ID8357828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2031324 
End bp2032565 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content43% 
IMG OID644963865 
Producthypothetical protein 
Protein accessionYP_003121382 
Protein GI256420729 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATCAA AAACAGTAGC AATAGTAGTT ATCATCGTTT TCGTCCTGAT TTTTCTGGGC 
CTGTTGATCT TTTCAGCAGG AGGGGGAACG ATTGATAATA AAAATATCGA CGAACAGGAG
CTGGCGCGTC AGAGTTTTTC CCATAAGGAC AAGCGGCCAG GGGGATGTTA TGCCATGTTT
AAAGCAATGT CAGAATTGTT TTATTATGAG ATCAAACCAC AGGTCGTTAC GAAACCATTC
ACACGTACTT ATACAAAAGA TGCTACGCTG TCCTCAACAG ATTATAATCT GTATGTACTG
GTAGCAGATG TTTTATACAC GTCTCCGGAA GATGCCGCTA ATATGATAAA ATTCGCGGCC
GCCGGTAATC AGTTGTTTAT TGCAGTGAAC AAACCCGACA GTATACTGCT GGATCTCCTG
CATCTCCACG TAGATGATGA AGGATTTTTC CAGTCTATGA CAAATGCAGA CCAGCGTTAT
GTGAATAAAA ACCTGGCGCC TGATACCGCC TTTTCACGCA AAGGTATCAG GGGTGGCAGC
TATATCACCG GCATGGATTC CAGCGCTACT ACTATCCTGG GAACAGATGC CTTTAACCGG
CCGAATTTTG TGAAAATAAA CGTAAGCGAA GGCGCGGTAT TTGTCCTGTT ACAACCATCT
ACACTGACGA ACTATTTTCT GATGCATGAC CGTAACATGG TATCGCTGGA AAGTCAGTTG
TCTTATACCA ATCATTACAT GGATCATGTA TACTGGGATG AATTTTACAA ATACCAGTAT
GCCCGTCAAT CATCCGATTT CAGTGAATGG CAGGTGCTGA TGCGCTATCC TGCTATGAGA
TGGGCGCTGT GGCTGGGAGT GGGCTTATTA CTGCTCTATA TCATATTTGA AAGTAAACGC
AGACAGCGGA TCGTTCCCGA AAGACCTCCA CTGGAGAATA ACTCACTGGA GTTTGTGGAT
GCGCTGGGGC AGCTTTATTA TCAGCAGCAT GATAACCGTA ACCTGGTACA AAAGATCATT
CTGCAATGGC AGGAGTTTAT ACGTACCCGT TATTATCTGA ATACAAATAA CATGGATCAT
GCATTTGCAG ATGCGTTGTC GCGCAAGGCG GCTATGCCGG TGGAGCATGT AAAAGAAATA
TTGCATGATA TACAACACAT GCGGGACACA ATGACTGTGT CAGATGATTT TCTGCAACAG
TTCTATAAGA AAATACAGGC GTTTTATATA AATACGAAAT AA
 
Protein sequence
MKSKTVAIVV IIVFVLIFLG LLIFSAGGGT IDNKNIDEQE LARQSFSHKD KRPGGCYAMF 
KAMSELFYYE IKPQVVTKPF TRTYTKDATL SSTDYNLYVL VADVLYTSPE DAANMIKFAA
AGNQLFIAVN KPDSILLDLL HLHVDDEGFF QSMTNADQRY VNKNLAPDTA FSRKGIRGGS
YITGMDSSAT TILGTDAFNR PNFVKINVSE GAVFVLLQPS TLTNYFLMHD RNMVSLESQL
SYTNHYMDHV YWDEFYKYQY ARQSSDFSEW QVLMRYPAMR WALWLGVGLL LLYIIFESKR
RQRIVPERPP LENNSLEFVD ALGQLYYQQH DNRNLVQKII LQWQEFIRTR YYLNTNNMDH
AFADALSRKA AMPVEHVKEI LHDIQHMRDT MTVSDDFLQQ FYKKIQAFYI NTK