Gene Cpin_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1682 
Symbol 
ID8357825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2028532 
End bp2029257 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content45% 
IMG OID644963862 
ProductRDD domain containing protein 
Protein accessionYP_003121379 
Protein GI256420726 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATA TAAAAATACC TACTTCCTTC AATATAGATC TGGAGTTTGA AACAGCTAAT 
ATTTTCCAGC GACTGATGGG CTGGCTGATC GATGGGTTTA TTAAGGTCCT GTATATTACT
GTATTAGGCT ACACTGTCAA TAACCTGCAA TTAGGAGAAG TAGCCAGCTA TGTTATTTAT
TTCTTCCTCG GCGTTCTGCC AATGGTCTGC TACTTCCCTG TGCTGGAAAT CATTATGAAC
GGACAAACGC CTGGTAAGCT GCTGATGAAT ATCAGGGTCA GGAATATGCA GGGTGGACAA
CCCAGTATGA GCCAACACCT GATCCGCTGG TTATTCCGGA TCATCGAAAC CCCCTATATC
ATTATCAACG GACTTATCCC ACTGATCGCT ATGTTAAGGT CTCCTTATTA TCAACGACTG
GGAGATGTAG TCGCAGGAAC GATTGTCGTA AGTACGAAAA CCAAGGCCAG TCTGAGCGGT
ACGATCTTCA GGGATATGTC GGCAGTAGAT TATACACCCC GTTTTCCCCA GATTCTGCGG
CTGTCAGACA GAGATATGAA TAAGATCAAA AACCTGATGG ACCAGGCAGT CAAATCCAAC
AATCCCGAGC TGACAGCACG CGTCGCTTAC CGGGTAAGAG ATGTATTGGA GATTCAGACG
GACATGATGC CGGGAGAATT TCTCGAAACA ATCTTAAACG ATTATAACTA CTATACCACG
CGGTAA
 
Protein sequence
MANIKIPTSF NIDLEFETAN IFQRLMGWLI DGFIKVLYIT VLGYTVNNLQ LGEVASYVIY 
FFLGVLPMVC YFPVLEIIMN GQTPGKLLMN IRVRNMQGGQ PSMSQHLIRW LFRIIETPYI
IINGLIPLIA MLRSPYYQRL GDVVAGTIVV STKTKASLSG TIFRDMSAVD YTPRFPQILR
LSDRDMNKIK NLMDQAVKSN NPELTARVAY RVRDVLEIQT DMMPGEFLET ILNDYNYYTT
R