| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1679 |
|---|
| Symbol | |
|---|
| ID | 8357821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 2026277 |
|---|
| End bp | 2026927 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644963859 |
|---|
| Product | putative translaldolase |
|---|
| Protein accession | YP_003121376 |
|---|
| Protein GI | 256420723 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0176] Transaldolase |
|---|
| TIGRFAM ID | [TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCT TCATAGATAC TGCAAACCTT GCACAGATAA AAGAAGCAAA CGACCTTGGC
GTTCTTGACG GTGTTACCAC CAACCCTTCC CTGATGGCTA AAGAAGGCAT CAAAGGAGAA
GCTAACATCC TCAAGCATTA TGAAACAATT TGCGAGCTGG TAGATGGTCC TATCAGTGCA
GAAGTACTGT CCACCGACTT CAATTCAATC ATCGAAGAAG GTAAGAAACT GGCGGCTATC
CACCCGAACA TCGTGGTGAA AGTGCCAATG ATCAGAGACG GTGTGAAAGC GCTGAAATGG
TTCACTGACA ACGGTATCAA AACAAACTGT ACACTGGTAT TCTCTGCTGG TCAGGCTATC
CTGGCTGCTA AAGCAGGCGC CAGCTTTGTA TCTCCGTTCA TCGGTCGTAT CGATGACAGC
AACTGGGATG GCGTTGACCT GATCGCCCAG ATCGCTCAGA TCTATAGCCT GCAGGGCTTC
AAAACCGAAA TCCTGGCGGC TTCTATCCGT ACTCCACTGC ACATCATCAA ATGTGCTGAA
GTTGGTGCTG ATGTTTGTAC CTGCCCGCTG GATTCAATCC TGGGTCTGCT CAAACACCCG
CTGACCGACA TCGGTCTTGC CAAATTCCTG GAAGACGCGA AAAAAATGTA A
|
|---|
| Protein sequence | MKFFIDTANL AQIKEANDLG VLDGVTTNPS LMAKEGIKGE ANILKHYETI CELVDGPISA
EVLSTDFNSI IEEGKKLAAI HPNIVVKVPM IRDGVKALKW FTDNGIKTNC TLVFSAGQAI
LAAKAGASFV SPFIGRIDDS NWDGVDLIAQ IAQIYSLQGF KTEILAASIR TPLHIIKCAE
VGADVCTCPL DSILGLLKHP LTDIGLAKFL EDAKKM
|
|---|
| |