Gene Cpin_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1672 
Symbol 
ID8357814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2016756 
End bp2017553 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content45% 
IMG OID644963852 
ProductMethyltransferase type 12 
Protein accessionYP_003121369 
Protein GI256420716 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTAG TACAACACAG CAACGCGAAT GTCAGATACC AGCAACAGGT GGATAATTCC 
ATTCACTATG TGCTGCCTTT TATCGATGCA GCTATGCCGG TAACACCTGA TCTCCGGATA
ATGGAAATAG GCTGTGGTGA AGGAGGCGTA TTGATACCTT TCCTGGAAAA AGGTTGTCAT
TGTGTGGGTG TGGATCTGTC GGATGACAAG ATTGCACTGG CGCATGACTA TCTGAAAGAA
TATGTAGATG CGGGCAACAT GCAGCTGATC AACAAAAATA TTTATGATGT TGATTTTCTG
GGTGAGTTCA AACATTCTTT TGATCTTATC ATTCTGAAAG ATGCGATCGA ACATATTCCT
GACCAGGCGA AGATCATTGG CTATCTCAAG AACCTGCTTA CTCCCCGTGG ACAAGTCTAT
TTCGGCTTTC CACCCTGGTA TATGCCGCAT GGCGGTCATC AGCAGACCTG CGAAAGCAAG
GTGCTGAATA TGATGCCTTA CATACATCTG CTTCCAAACC CGCTCTACAG AGGGGTTTTA
CGTGCCTTTG GCGAACCGCC TAATATCATT GCGGAACTGA TGGAGATCAA GGAAACCGGT
ATTTCCATTG AGCGCTTTGA GCGGATCGTG AAACAGCAGG GATATGATAT AACGAAGAAG
CAATTCTATC TGATCAATCC GATCTACAAA TATAAATTCG GTCTGAAACC AAGACTGCAA
TGGGGGCCGG TAGCGGCTGT ACCGTTTGTA AGGAACTTCT TGACGACCTG TGTTTATTAT
ATGATCAAGG CGCAATAG
 
Protein sequence
MSLVQHSNAN VRYQQQVDNS IHYVLPFIDA AMPVTPDLRI MEIGCGEGGV LIPFLEKGCH 
CVGVDLSDDK IALAHDYLKE YVDAGNMQLI NKNIYDVDFL GEFKHSFDLI ILKDAIEHIP
DQAKIIGYLK NLLTPRGQVY FGFPPWYMPH GGHQQTCESK VLNMMPYIHL LPNPLYRGVL
RAFGEPPNII AELMEIKETG ISIERFERIV KQQGYDITKK QFYLINPIYK YKFGLKPRLQ
WGPVAAVPFV RNFLTTCVYY MIKAQ