Gene Cpin_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1670 
Symbol 
ID8357812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2014972 
End bp2015733 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content45% 
IMG OID644963850 
ProductPhosphosulfolactate synthase 
Protein accessionYP_003121367 
Protein GI256420714 
COG category[S] Function unknown 
COG ID[COG1809] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTA ATCTGACACA AATTCCCGAT CGGACAAAGA AACCTCGTAA CCATGGGCTG 
ACTATGGTGA TGGATAAAGG GCTAAGTTTG GAAGAAGCCA AGAATTTTTT ATCGGTAGCG
TCTCCTCACG TAGATATCCT GAAACTGGGT TTTGGAACCT CGTTCGTAAC TCCTAACCTG
CGCCAGAAAA TAGAATTATA CCAATCTGCC AATATCCCCG TATACTTCGG TGGAACTTTA
TTTGAGGCAT TTCTGATCCG TAATCAGTTT GATGACTTTG TGAATGTGAT CAAAGATTAT
GGGATTAAAC ATATTGAAGT TTCCGACGGA TCTATCACCA TTCCGCACGC TGAAAAATGC
GGTTATATCG AGAAGCTGGC TAAAATAGCA ACCGTATTGA GCGAAGTAGG CTCCAAGGAT
GCAGAACACA TCATTCCTCC TTATAAATGG ATCGAACTGA TGAATGCAGA ACTGGGCGCC
GGCGCTACTT ATGTAATCGC AGAAGCACGC GAAAGCGGTA ACGTAGGTAT CTATCGCGGT
ACCGGTGAAG TACGTGAAGG GCTGGTACAG GAAATCCTGA CCAAGATCCC GTCTGAGAAA
ATTATTTGGG AAGCTCCGCA GAAAGCACAG CAGCTGTATT TCCTGGAACT GATCGGCTGT
AATGTGAACC TGGGTAACCT GGCGCCACAC GAAGTGATCT CCCTGGAAGC AATGCGTATC
GGTCTGAGAG GAGACACTTT CCACCTGTTC CTGAATCAAT AA
 
Protein sequence
MNFNLTQIPD RTKKPRNHGL TMVMDKGLSL EEAKNFLSVA SPHVDILKLG FGTSFVTPNL 
RQKIELYQSA NIPVYFGGTL FEAFLIRNQF DDFVNVIKDY GIKHIEVSDG SITIPHAEKC
GYIEKLAKIA TVLSEVGSKD AEHIIPPYKW IELMNAELGA GATYVIAEAR ESGNVGIYRG
TGEVREGLVQ EILTKIPSEK IIWEAPQKAQ QLYFLELIGC NVNLGNLAPH EVISLEAMRI
GLRGDTFHLF LNQ