Gene Cpin_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1666 
Symbol 
ID8357808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2011081 
End bp2011860 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content47% 
IMG OID644963846 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003121363 
Protein GI256420710 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.458425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTCG AACATATCCT GTATAATGTA AGCGGACGTG TAGCAACGAT CACGCTCAAC 
CGTCCTGAAA AACGCAATGC GCTGAACGGC GCTACAGTAG GAGAACTACG TACAGCCTTT
AATCAGGCTG AGACAGATCC CGAAGTGAAA GTAATTATCC TGAAAGGCGC CGGTGAAGCT
TTTTGCGCCG GAGCAGACCT AGAATATCTC CAGCAACTCC AACGTAATAC CAGAGAAGAA
AATCTTGCCG ATTCAAAAGA ACTGATGCAG CTCATGCAGC AGATCTATTA TCATAATAAA
GTAGTTATTG CCCAGGTAGA AGGACATGCG ATTGCAGGTG GCTGCGGACT CGTAACAATC
TGCGACCTGA GTTATGCAAT ACCTGCTGCC AAACTGGGAT ACACGGAGGT GAAAATCGGT
TTTATACCAG CGCTGGTATC CGTATTTCTG GTCAGGAAAA TAGGTGAGGG GCGTGCCCGC
GACTTACTGC TCACCGGTAG ATTAATCACT GCCGAAAAGG CGGAATATTA TGGTTTGCTG
AATGAAGTGG TGCCCGCCGA CCTTATTGAA GCCCATGTGG CAAAAGTGGC GGAAGATCTC
TGTACCGGTG CTTCTGCCAA TTCGCTTAAA GTGACCAAAA AACTGATTAC TTCTGTATTT
GATCAGCCGA TAGAAAATGC ATTGCTGAAC GCCGCTGAAA TGAATGCAGA AACCAGGGAA
CATGCTGATT GTCAGAGAGG TATAAACGCG TTTCTGGCGA AGGAAAAGAT GGTCTGGTAA
 
Protein sequence
MVFEHILYNV SGRVATITLN RPEKRNALNG ATVGELRTAF NQAETDPEVK VIILKGAGEA 
FCAGADLEYL QQLQRNTREE NLADSKELMQ LMQQIYYHNK VVIAQVEGHA IAGGCGLVTI
CDLSYAIPAA KLGYTEVKIG FIPALVSVFL VRKIGEGRAR DLLLTGRLIT AEKAEYYGLL
NEVVPADLIE AHVAKVAEDL CTGASANSLK VTKKLITSVF DQPIENALLN AAEMNAETRE
HADCQRGINA FLAKEKMVW