Gene Cpin_1647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1647 
Symbol 
ID8357789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1984967 
End bp1985359 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content42% 
IMG OID644963827 
Productprotein of unknown function DUF1573 
Protein accessionYP_003121344 
Protein GI256420691 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT TTATCTTATC CCTATTTGCG AGCATGCTGT TAACCACAGC TCTCTGGGCG 
CAGACACAGA CCGGAAACCC TGTTGATGCA AAAGTGAAAT TCAAACAGGA AACTATCGAT
TTCGGTAAGA CCAAGCTGAA CAAGCCTGTT TCAGTTGATT TTGAATTCAC AAACACTACT
AAAGAACCAG TTCTGATCGA AACTGCCCGT GCTAGTTGCG GTTGTACTAC TCCTACATGG
ACTAAAGAAC CAATTCTGCC AGGTAAGAAA GGTAAAGTAA CTGCCAGCTA TAGCGCAAAC
AGCGTTGGTC AGCAGAACAA AACTGTTTGG GTAAGGTTGA AAGGTGTTGA CCAGGATAAA
GAACTTCACC TGACAGGTAC AGTTGAAAAC TAA
 
Protein sequence
MKKFILSLFA SMLLTTALWA QTQTGNPVDA KVKFKQETID FGKTKLNKPV SVDFEFTNTT 
KEPVLIETAR ASCGCTTPTW TKEPILPGKK GKVTASYSAN SVGQQNKTVW VRLKGVDQDK
ELHLTGTVEN