| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1646 |
|---|
| Symbol | |
|---|
| ID | 8357788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 1983586 |
|---|
| End bp | 1984812 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644963826 |
|---|
| Product | aspartate aminotransferase |
|---|
| Protein accession | YP_003121343 |
|---|
| Protein GI | 256420690 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACCA TTAGTAAGAG AGGGGAGCAA ATGCCACCTT CTCCTATCAG GAAGCTGGTT
CCTTACGCAG AAGCAGCCAA AAAAAACGGA ACCAGGGTTT ATCACCTCAA TATCGGTCAG
CCGGATATTG AAACACCAAA ACCAGTACTG GATGCAGTAC GTCATTCAGA CTTCAAAGTA
CTTGAATACA GTCACAGCGC AGGTAACGAA AGCTACCGCC GTAAACTGGT GACCTATTAT
GAGCGATTCG GTATCAAGCT GAACCATCAG CAGATCATCG TTACCACTGG CGGTTCTGAG
GCGATTCTGT TTGCCTTTAT GGCCTGCCTG GATGCAGGAG ATGAAGTACT GGTTCCTGAG
CCTTTCTATG CTAACTATAA TGGTTTTGCA ATCGAGGCAG GCGTACATGT ACGTACCATT
ACCGCAAATA TTGAAACTGG CTTTGCCCTG CCGGCAATGG AAGCATTTGA GAAAGCGATC
ACGCCCCGTA CCAAAGCGAT CATGATCTGC AATCCAAACA ACCCAACCGG TTATCTATAT
AGTAAAGAAG AACTTTCCAT ATTAAAGGAT TTGTGTCTTC GTCATAACCT TTACCTGTTC
TCCGATGAGG CATACCGCGA GTTTTGCTAT ACCGGTGAAC ATTTCTCTGC CATGAACCTG
GAAGGCCTGG AAGAAAATGT GATCCTGATG GATACCATTT CCAAACGTTA CAGCGCCTGC
GGGGGCAGAA TCGGTGCGCT GGTGACTAAA AACCAGACAG TACTGGATGC GGTAATGAAA
TTCGCCCAGG CACGTCTGAG TCCTCCTTCC TTTGCGCAGA TCGCCGGTGA AGCTGCGATT
GATCTCCCGT TAAACTATTT TGACGAGATT AAAGCAGCAT ACCTCAGCCG TCGCGATGTG
CTGGTGAGTA TGCTGAATGA TATTCCAGGC GTTTTCTGTC CGAATCCCGG AGGAGCATTT
TATGCTATCG CCAGATTGCC GATTGATAAT TCCGACAAAT TCTGCCAATG GTTACTGGAA
TCGTTCTCTT ATGAGCAGCA GACGGTAATG CTCTCCCCTG CTACGGGCTT CTATGCTACG
CAGGGTCTGG GAACAGACGA AGTACGCCTC GCATATGTAC TTAACACGCA AGACATCAAA
AATGCGATGA TCTGTCTTGC AAAGGCACTT GAGGTGTATC CAGGTCGTAC CGCTGTGAAG
GAAGCAACAC TAGCCGGTCA GCAATAA
|
|---|
| Protein sequence | MPTISKRGEQ MPPSPIRKLV PYAEAAKKNG TRVYHLNIGQ PDIETPKPVL DAVRHSDFKV
LEYSHSAGNE SYRRKLVTYY ERFGIKLNHQ QIIVTTGGSE AILFAFMACL DAGDEVLVPE
PFYANYNGFA IEAGVHVRTI TANIETGFAL PAMEAFEKAI TPRTKAIMIC NPNNPTGYLY
SKEELSILKD LCLRHNLYLF SDEAYREFCY TGEHFSAMNL EGLEENVILM DTISKRYSAC
GGRIGALVTK NQTVLDAVMK FAQARLSPPS FAQIAGEAAI DLPLNYFDEI KAAYLSRRDV
LVSMLNDIPG VFCPNPGGAF YAIARLPIDN SDKFCQWLLE SFSYEQQTVM LSPATGFYAT
QGLGTDEVRL AYVLNTQDIK NAMICLAKAL EVYPGRTAVK EATLAGQQ
|
|---|
| |