Gene Cpin_1634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1634 
Symbol 
ID8357776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1973943 
End bp1974389 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content47% 
IMG OID644963814 
Productribosomal protein L15 
Protein accessionYP_003121331 
Protein GI256420678 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0200] Ribosomal protein L15 
TIGRFAM ID[TIGR01071] ribosomal protein L15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGC ATACGTTACA ACCTGCACAG GGTTCCGTAC ATAAAGAGAA GCGCCTTGGT 
CGTGGTGAAG CATCCGGTAA AGGTGGTACT TCCACAAAAG GTAATAAAGG TGGTCAGTCA
CGTGCTGGTT ATCAGAGCAA AAGAGGTCAC GAAGGTGGTC AGATGCCAAT TCAGCGTCGT
ATGCCAAAAC GTGGTTTCAA GAGCTTAAAT CCAACTGAAT ATCAGGTGTT CAACATCGGT
CAGATCGACC ACCTGGTTGA AAAATATGGT CTCCAGGATT TCTCTCTGGA AAACCTGTAC
ATTAACGGGT TGATCAACAG GACCGCGAAA GTGAAAATCC TGGGTCAGGG AGAATTGAAG
GCTAAAGTAA CCGCAAAAGT GAATGCGATC AGCGAAAAAG CCAAGCAGCT GATAGAAGCA
GCGGGTGGAA CGGTAGAGCT GGTATAA
 
Protein sequence
MNLHTLQPAQ GSVHKEKRLG RGEASGKGGT STKGNKGGQS RAGYQSKRGH EGGQMPIQRR 
MPKRGFKSLN PTEYQVFNIG QIDHLVEKYG LQDFSLENLY INGLINRTAK VKILGQGELK
AKVTAKVNAI SEKAKQLIEA AGGTVELV