Gene Cpin_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1629 
Symbol 
ID8357771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1971479 
End bp1971877 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content43% 
IMG OID644963809 
Productribosomal protein S8 
Protein accessionYP_003121326 
Protein GI256420673 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACTG ATCCAATAGC AGACTTCCTG ACCAGAATCC GGAACGCGCA AATGGCCAAC 
CACAGGATTG TGGAAATTCC TGCCTCAAAG CTGAAAAAAC GTATCACTGA GATACTGTAC
GACAAAGGTT ATATCCTGAA GTACAAATTC GAAGAAGATA ACAAACAAGG TGTTATCAAG
ATAGCGCTGA AATATGATCC TCAGACTAAG ACACCTGCTA TCACTGATAT GCAGCGTATC
AGCCGTCCTG GTTTACGCCA GTACGCTAAG CCTGGAGATT TCAAACGTGT AAAGAACGGT
CTGGGTATCG CTATCGTTTC CACTTCTAAA GGTGTAATGA CCGATAAAGA AGCTAAAGTA
CAAAATGTAG GCGGCGAGCT CGTTTGCTTC GTCTATTAA
 
Protein sequence
MVTDPIADFL TRIRNAQMAN HRIVEIPASK LKKRITEILY DKGYILKYKF EEDNKQGVIK 
IALKYDPQTK TPAITDMQRI SRPGLRQYAK PGDFKRVKNG LGIAIVSTSK GVMTDKEAKV
QNVGGELVCF VY