Gene Cpin_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1625 
Symbol 
ID8357767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1969570 
End bp1969938 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content48% 
IMG OID644963805 
Productribosomal protein L14 
Protein accessionYP_003121322 
Protein GI256420669 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0093] Ribosomal protein L14 
TIGRFAM ID[TIGR01067] ribosomal protein L14, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACAAC AAGAATCAAG GCTGAATGTA GCTGATAACA GTGGTGCCAA AGAGGTACTG 
TGTATTAGGG TATTAGGCAA CTCCGGCCAG GATTACGCTA AAGTGGGCGA TAAGATCGTA
GTGACTGTGA AGGATGCAAT CCCAGGCGGT GGCGTAAAGA AAGGTATGGT AACCAAAGCT
GTTATCGTTA GAACTAAAAA CAAGCTGCGC CGTAAAGACG GATCTTACAT CCGTTTCGAC
GATAATGCCG TTGTATTGCT GAATAACTCT GACGAGCCAC GCGGTACCCG TATTTTCGGT
CCGGTTGCCC GTGAGCTGCG CGATAAGGGA TACATGAAGA TTATCTCTCT GGCTCCCGAG
GTGCTGTAA
 
Protein sequence
MIQQESRLNV ADNSGAKEVL CIRVLGNSGQ DYAKVGDKIV VTVKDAIPGG GVKKGMVTKA 
VIVRTKNKLR RKDGSYIRFD DNAVVLLNNS DEPRGTRIFG PVARELRDKG YMKIISLAPE
VL