Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1622 |
Symbol | |
ID | 8357764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1968483 |
End bp | 1968902 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644963802 |
Product | ribosomal protein L16 |
Protein accession | YP_003121319 |
Protein GI | 256420666 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0197] Ribosomal protein L16/L10E |
TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTACAGC CAAAGAGAAC GAAACACAGG AAGATGCATA AAGGCCGCAT CAAAGGTAAC GCTAAGCGTG GCGCGGCAAT CTCCTTTGGT AGTTTCGGTC TGAAAGCATT AGAACCTAAG TGGATCACCG ATAGGCAGAT TGAAGCTGCC AGGGTTGCTC TGACCAGGCA TATGAAACGT GAAGGTAACG TGTGGATCCG CATATTCCCG GATAAATCTA TTACCGCCAA ACCACTGGAA GTGAGGATGG GTAAAGGTAA AGGTGCTCCA GATCATTGGG CTGCTGTAGT AAAACCAGGC CGCATCTTGT TTGAGGCGGA TGGTGTTCCA TTACAGGTTG CTAAAGAAGC AATGGAACTG GCTGCACAGA AACTGCCGAT TAAAGTGAAA TTTGTAGTGC GTCCCGATTA CGTTGCATAA
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Protein sequence | MLQPKRTKHR KMHKGRIKGN AKRGAAISFG SFGLKALEPK WITDRQIEAA RVALTRHMKR EGNVWIRIFP DKSITAKPLE VRMGKGKGAP DHWAAVVKPG RILFEADGVP LQVAKEAMEL AAQKLPIKVK FVVRPDYVA
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