Gene Cpin_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1622 
Symbol 
ID8357764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1968483 
End bp1968902 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content47% 
IMG OID644963802 
Productribosomal protein L16 
Protein accessionYP_003121319 
Protein GI256420666 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0197] Ribosomal protein L16/L10E 
TIGRFAM ID[TIGR01164] ribosomal protein L16, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACAGC CAAAGAGAAC GAAACACAGG AAGATGCATA AAGGCCGCAT CAAAGGTAAC 
GCTAAGCGTG GCGCGGCAAT CTCCTTTGGT AGTTTCGGTC TGAAAGCATT AGAACCTAAG
TGGATCACCG ATAGGCAGAT TGAAGCTGCC AGGGTTGCTC TGACCAGGCA TATGAAACGT
GAAGGTAACG TGTGGATCCG CATATTCCCG GATAAATCTA TTACCGCCAA ACCACTGGAA
GTGAGGATGG GTAAAGGTAA AGGTGCTCCA GATCATTGGG CTGCTGTAGT AAAACCAGGC
CGCATCTTGT TTGAGGCGGA TGGTGTTCCA TTACAGGTTG CTAAAGAAGC AATGGAACTG
GCTGCACAGA AACTGCCGAT TAAAGTGAAA TTTGTAGTGC GTCCCGATTA CGTTGCATAA
 
Protein sequence
MLQPKRTKHR KMHKGRIKGN AKRGAAISFG SFGLKALEPK WITDRQIEAA RVALTRHMKR 
EGNVWIRIFP DKSITAKPLE VRMGKGKGAP DHWAAVVKPG RILFEADGVP LQVAKEAMEL
AAQKLPIKVK FVVRPDYVA