Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1618 |
Symbol | |
ID | 8357760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1965966 |
End bp | 1966799 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644963798 |
Product | ribosomal protein L2 |
Protein accession | YP_003121315 |
Protein GI | 256420662 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTGA AGAAATACAA ACCGATGACA GCCGGTACCC GTTGGAAAAT AGGCAACGCG TTCGCTGAGC TGACCACGGA TACCCCTGAA AAAAGCCTGC TGGAGCCTAT CAAGAAATCC GGCGGTAGAA ACGTACAGGG TAGAAGATCT ATGCGCTACA TTGGTGGCGG TCACAAACAA CACTACCGTA TCATAGACTT CAAACGCGAC AAACACAATA TTCCAGCTAC TGTTAAGACT ATCGAATACG ATCCGAATCG TAGCGCATTC ATCGCACTGC TGAGCTATGC AGATGGTGAA AAACGTTACA TCCTGGCTCC TCAGGGTCTG CAGGTTGGTG CTACCGTATT AAGCGGTTCC GATGCTGCTC CTGAAGTTGG TAACGCGCTG GTGCTGAAAA ACATGCCATT AGGTACTGTT GTTCACAACA TCGAATTACA GCCTGGTAGA GGTGGTGCTA TCGCAAGAAG CGCTGGTACT TATGCTCAGC TGTCCAACAA GGAAGAAAAA TATGCAGTAC TGAAAATGCC TTCTGGCGAG CTGCGTAAAG TGTTGATCAC TTGTGCTGCA ACTGTAGGTA CAGTTTCTAA CTCTGATCAC GCGCTGCAGT CAATTGGTAA AGCAGGTGCT AACCGTTGGA GAGGTATCAA GCCTCGTAAC CGAGGTGTGG CGATGAACCC AGTGGATCAC CCGATGGGTG GTGGTGAAGG TAAATCTTCA GGTGGTCACC CAAGATCCAG AACAGGTAAA TATGCGAAAG GTCTGAAAAC CAGAAAATCG CATAAGAGCT CTGACAAACT GATCATCAGC AGGAAAAACG GTAAGAAATT ATAA
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Protein sequence | MALKKYKPMT AGTRWKIGNA FAELTTDTPE KSLLEPIKKS GGRNVQGRRS MRYIGGGHKQ HYRIIDFKRD KHNIPATVKT IEYDPNRSAF IALLSYADGE KRYILAPQGL QVGATVLSGS DAAPEVGNAL VLKNMPLGTV VHNIELQPGR GGAIARSAGT YAQLSNKEEK YAVLKMPSGE LRKVLITCAA TVGTVSNSDH ALQSIGKAGA NRWRGIKPRN RGVAMNPVDH PMGGGEGKSS GGHPRSRTGK YAKGLKTRKS HKSSDKLIIS RKNGKKL
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