Gene Cpin_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1618 
Symbol 
ID8357760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1965966 
End bp1966799 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content48% 
IMG OID644963798 
Productribosomal protein L2 
Protein accessionYP_003121315 
Protein GI256420662 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGA AGAAATACAA ACCGATGACA GCCGGTACCC GTTGGAAAAT AGGCAACGCG 
TTCGCTGAGC TGACCACGGA TACCCCTGAA AAAAGCCTGC TGGAGCCTAT CAAGAAATCC
GGCGGTAGAA ACGTACAGGG TAGAAGATCT ATGCGCTACA TTGGTGGCGG TCACAAACAA
CACTACCGTA TCATAGACTT CAAACGCGAC AAACACAATA TTCCAGCTAC TGTTAAGACT
ATCGAATACG ATCCGAATCG TAGCGCATTC ATCGCACTGC TGAGCTATGC AGATGGTGAA
AAACGTTACA TCCTGGCTCC TCAGGGTCTG CAGGTTGGTG CTACCGTATT AAGCGGTTCC
GATGCTGCTC CTGAAGTTGG TAACGCGCTG GTGCTGAAAA ACATGCCATT AGGTACTGTT
GTTCACAACA TCGAATTACA GCCTGGTAGA GGTGGTGCTA TCGCAAGAAG CGCTGGTACT
TATGCTCAGC TGTCCAACAA GGAAGAAAAA TATGCAGTAC TGAAAATGCC TTCTGGCGAG
CTGCGTAAAG TGTTGATCAC TTGTGCTGCA ACTGTAGGTA CAGTTTCTAA CTCTGATCAC
GCGCTGCAGT CAATTGGTAA AGCAGGTGCT AACCGTTGGA GAGGTATCAA GCCTCGTAAC
CGAGGTGTGG CGATGAACCC AGTGGATCAC CCGATGGGTG GTGGTGAAGG TAAATCTTCA
GGTGGTCACC CAAGATCCAG AACAGGTAAA TATGCGAAAG GTCTGAAAAC CAGAAAATCG
CATAAGAGCT CTGACAAACT GATCATCAGC AGGAAAAACG GTAAGAAATT ATAA
 
Protein sequence
MALKKYKPMT AGTRWKIGNA FAELTTDTPE KSLLEPIKKS GGRNVQGRRS MRYIGGGHKQ 
HYRIIDFKRD KHNIPATVKT IEYDPNRSAF IALLSYADGE KRYILAPQGL QVGATVLSGS
DAAPEVGNAL VLKNMPLGTV VHNIELQPGR GGAIARSAGT YAQLSNKEEK YAVLKMPSGE
LRKVLITCAA TVGTVSNSDH ALQSIGKAGA NRWRGIKPRN RGVAMNPVDH PMGGGEGKSS
GGHPRSRTGK YAKGLKTRKS HKSSDKLIIS RKNGKKL