Gene Cpin_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1617 
Symbol 
ID8357759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1965580 
End bp1965879 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content41% 
IMG OID644963797 
ProductRibosomal protein L25/L23 
Protein accessionYP_003121314 
Protein GI256420661 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTTT CAGACGTTTT AATCAAACCG GTGGTTAGTG AAAAAGTGAA CAAAGCCACT 
GATAAATTCA ACCGCTACTA CTTCATCGTA GACAAGAAAT CCAACAAACT GGAGATCAAA
AAAGCAGTGG AAGAATTCTA CGGTGTATCC GTAGCTGAAG TGAATACTGC CGTAATGCCA
GGTAAGGCTA AACAGCGCTT TACCAAAGCA GGCTTCATCG CCGGTAAAAA GCCTTCTTAC
AAGAAAGCTG TAGTTACACT GGCTCAAGGA GAAACTATAG ATCTGTATGC TAACATATAG
 
Protein sequence
MRLSDVLIKP VVSEKVNKAT DKFNRYYFIV DKKSNKLEIK KAVEEFYGVS VAEVNTAVMP 
GKAKQRFTKA GFIAGKKPSY KKAVVTLAQG ETIDLYANI