Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1616 |
Symbol | |
ID | 8357758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1964885 |
End bp | 1965523 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644963796 |
Product | ribosomal protein L4/L1e |
Protein accession | YP_003121313 |
Protein GI | 256420660 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTTG ATATTTTAAA TAAAGAAGGT AAGAAAACCG GCAGGACTAT TGAGCTTCCT GAGGAGATTT TCGGTGTGGA GCCTAATAAC CACGTTATTT ACCTGGCAGT AAAACAGTAT CTGGCCGCTC AGCGTCAGGG TACTCACAAG GTTAAGACCA GAGCTGAAGT GAAAGGTGCT TCCCGCAAGC TGCACAAACA AAAAGGTACT GGTGGTTCCC GTAAAGGTAA CATCCGTAAC CCACTGTATA AAGGTGGTGG TACCATCTTC GGTCCTAAGC CACATAAATA TGACATCAAG CTGAACAGAA AAGTGAAAGA TCTCGCAAAG ATCTCCGCTC TGTCTACTAA AGCTAAAGAG AACAGCATCA TCGTTGTTGA AGATCTGACA CTGGATACAC CAAAAACCAA AGCGTTTGCA GGTATCCTGA ACAATCTGAA AGTAAACGTA TCAGGCCGTA AGACTTTATT CGTACTGCCA GAGTATAACG ATAATGTTTA CCTGTCTCTG AGAAACATTC CTACTGTGGA TAGCGTGATG TTGAGCGATA TCAACACTTA CGAAATCATG AACAGCAATG TTCTGGTGTT CACAGAGAGT GCAGCTAAGA TCTTCACTGA AGAGCCAGTA GAAGCTTAA
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Protein sequence | MQVDILNKEG KKTGRTIELP EEIFGVEPNN HVIYLAVKQY LAAQRQGTHK VKTRAEVKGA SRKLHKQKGT GGSRKGNIRN PLYKGGGTIF GPKPHKYDIK LNRKVKDLAK ISALSTKAKE NSIIVVEDLT LDTPKTKAFA GILNNLKVNV SGRKTLFVLP EYNDNVYLSL RNIPTVDSVM LSDINTYEIM NSNVLVFTES AAKIFTEEPV EA
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