Gene Cpin_1611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1611 
Symbol 
ID8357753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1957136 
End bp1957636 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content53% 
IMG OID644963791 
Producthypothetical protein 
Protein accessionYP_003121308 
Protein GI256420655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.624946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTA TCCACAAACA GCTCCTACTG TTGTGTCTTG CTGCCGGTGG CGTTCCCACC 
GCGAGGGCGC AGCTGCTCAA CAGACAGGTC AATGCCAGTA CCGGAGGTGG CGGCCCCGCA
GGGCCTTATA TCTTCCAGTA CACCGTCGGC GAAATTACCG TCAGCTCCCT GCAAAAATCA
GCCATATTGC TGACCCAGGG CTTCCACCAG GCAGAAGAGC TACCCCCAAA CCCAGCAGGT
GCAGAAGTAG TTGTCAACCT TATTCTTTAC CCAAACCCGG TTTCCACCAC GCTTAAGCTC
CAGTTCGACA TGCTGTCCAA CAACCCGGTT GTCTTTTTCA TTGTTAACAG CAGCGGACAG
GTCGTTCACC AGGAAAGCAG GTCTTATGGC GCCGGTAAAG TGCTGATCAC ACTGCCGGTT
AACAGGTTTG CCGCCGGTAT TTATACCGTA GTGCTCAAAG CAGGCGGTCA CATGTATGAA
GAGAAACTGG TGATCCAATA A
 
Protein sequence
MKIIHKQLLL LCLAAGGVPT ARAQLLNRQV NASTGGGGPA GPYIFQYTVG EITVSSLQKS 
AILLTQGFHQ AEELPPNPAG AEVVVNLILY PNPVSTTLKL QFDMLSNNPV VFFIVNSSGQ
VVHQESRSYG AGKVLITLPV NRFAAGIYTV VLKAGGHMYE EKLVIQ