Gene Cpin_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1610 
Symbol 
ID8357752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1955946 
End bp1957118 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content51% 
IMG OID644963790 
Producthypothetical protein 
Protein accessionYP_003121307 
Protein GI256420654 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.834911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA ATTTTACACT TTGGCTCTGT GCTGCCGGTT TGCTCGCCCA TAGCGGATCG 
ATGGCCCAGG TGAAAGGTAT CAAGACCATT AATACCGGCG CCGCATTCCT CCTCGTCAAC
CCCGATGCAC GCAGCAGCGG TACCGGTGAC GCCGCTACCG GTCTTGAACC CAATGCAAAC
GCCTTGTTCG CAAATGCCGC CAAAATCGTC TTTGCCGACG ACTGGGGTGT CAGTGCCTCC
TACTCTCCCT GGATGTGGGA TCTCAACAAC AGCGATCAGC GGACCAACAT GGGCTATGTT
TCCGCTTTTA AAAATTTTAA GGATAATACA GAAGCGATCG GCGTATCCAT GCGGTACTTT
ACAAATGGTA CCATCATTTT CAGAGATGAT AACGGTACCG AACTGCAACG GTATAAACCC
AGGGAATACG CGATAGATGC AACGTATGCG CGTAAACTCG GTGCGCATTA CGCCCTCGCC
ATCAGCCTCC GTTATATCAG GAGCGACCTC GGACAGGGCA GCTTCAATGG ATTACAACAA
AATCCTGCCA GCGCTGTAGC GGGCGACATT GCCCTCTATT CCCAGAATTA TGGCAAAAGT
GATCCGGCCG GCAACCGTTA CTCCTGGGGT ATTGCCTTCA CTAACATAGG ATCCAAACTG
AATTATACGG ATGACAGTGA CCGTAGAGCC TTCCTTCCCG CAAATCTGCG TATAGGCGGC
GGATACACAT TCGTCAATAC AGTAGAACAC CAGTTCACCC TGCTGGCAGA TATCAATAAA
CTGCTGATCC CCACGCCCCC TAAATATGCC GTGGATGCCA ATGGACAACC TACCGGAGAA
ATCATCGAAG GTAAAGATCC TGGCCGCAGC ATGACAGAAG CCCTCTTTAC CTCCTTCTGG
GACGCTCCGG GCGGCTTCCA GGAAGAAGTC AGGGAATTTA CGGTTGCCGG CGGACTGGAA
TACACTTACC AGCACCAGCT GTTTATCCGT ACAGGCTACT TTTATGAACA TCCCCAGAAA
GGATACCGGC AGCACTTTTC AGCCGGCATA GGCACCTGCA TCAAAGGCGT ATCTCTTGAC
ATGGCCTATA TCATGCCTAC GGCAAATAGT CTGTATCAGC GCAAGACGCT GAAATTTACC
ATCGCCTATC ACCTAGGCGG CGGCGCTAAA TAA
 
Protein sequence
MKKNFTLWLC AAGLLAHSGS MAQVKGIKTI NTGAAFLLVN PDARSSGTGD AATGLEPNAN 
ALFANAAKIV FADDWGVSAS YSPWMWDLNN SDQRTNMGYV SAFKNFKDNT EAIGVSMRYF
TNGTIIFRDD NGTELQRYKP REYAIDATYA RKLGAHYALA ISLRYIRSDL GQGSFNGLQQ
NPASAVAGDI ALYSQNYGKS DPAGNRYSWG IAFTNIGSKL NYTDDSDRRA FLPANLRIGG
GYTFVNTVEH QFTLLADINK LLIPTPPKYA VDANGQPTGE IIEGKDPGRS MTEALFTSFW
DAPGGFQEEV REFTVAGGLE YTYQHQLFIR TGYFYEHPQK GYRQHFSAGI GTCIKGVSLD
MAYIMPTANS LYQRKTLKFT IAYHLGGGAK