Gene Cpin_1598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1598 
Symbol 
ID8357740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1942925 
End bp1943353 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content46% 
IMG OID644963778 
Producthypothetical protein 
Protein accessionYP_003121295 
Protein GI256420642 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.82539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAGTA TTTTGTTCCT GCTTCTGATT GTAGCCTTGG GAGGATCTGT ACATGCACAG 
GTTCTTCAAT CCCCTGATAA AGCTTTCGCG CAAGCGCAGG CATCAGGCAA AAAAATCATG
TTAGTTTTCT CCGGCTCCGA CTGGTGTATA CCCTGCATCC GTTTCAATAA ACAAATACTC
TCAGACAGCA GCTTCCTGCG TTTTGCAGGA GAAAACCTGG TGTTACTGGA GGCTGATTTT
CCGCAGAGAA AAAAGATCGC CGCCCCCCTC CGGCAACAAT ATGATTCACT GGCGGCAGCA
TTTAATCCGG AAGGTGCTTT TCCACAACTG GTGCTGTTAA GTCCACAGAA AAAACTGCTT
GCTTACATTC CCTACCGGGA AGAAACACCA GATGGATTTA TCACGACGCT TAAACACCTT
CTTCAATAA
 
Protein sequence
MRSILFLLLI VALGGSVHAQ VLQSPDKAFA QAQASGKKIM LVFSGSDWCI PCIRFNKQIL 
SDSSFLRFAG ENLVLLEADF PQRKKIAAPL RQQYDSLAAA FNPEGAFPQL VLLSPQKKLL
AYIPYREETP DGFITTLKHL LQ