Gene Cpin_1595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1595 
Symbol 
ID8357737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1940548 
End bp1941762 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content48% 
IMG OID644963775 
Producthypothetical protein 
Protein accessionYP_003121292 
Protein GI256420639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.930547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAC TATTTATTGC GGCGGGACTG CTGGCTGCCT ATTTCTCAGC ATCCGCGCAG 
CAAAAGACCG ACAGCTCGGC TTATAAGAAA CAACAGGTAT CACAGACGGA TATACAGGTA
TTATTCTCCT TTTATACACA GGACGGGAAG CATTCTGCGG TCACCGGCGG AATAGGCACG
GAAAACCTGC AGGTATATGC TACGGATGTG TCTATTACAC ACCGGCCGGA CCTGCGGAAT
ACCTACTACC TCGGACTGGG CATCGATATG ATCACCTCCG CCTCTACAGA TAATATCGAC
TTCGTAAAAT CTTCTGCCTC CCGGCATGAC AACCGTTTTC ATCTGAATGC GGGTTATAGT
CGTCAGCTGA AAAAACCGAA TATCCGCGTA GGCATCAACA GCGGACTTGC ACTGGAGTCG
GATTATCTGT CCGTACCGCT TGGCGTATCT GTCGAACATG ACAATGCAGA TCATAGCCGG
CAATGGTCCG CCGGATTACA GTGTTACTTT GATGACCTGC GATGGGGAAG ATTTGATCCG
GATTATTACA GTCCGGAGAC ACTTGTCTAC CCCTCCGAAC TCAGAGACAC CGCCTGGTTT
GATATCTACC GGCGAACGTC TTATAACCTC AACCTGGCCC TTTACCAGGT TGTTAATCAG
CGGATGCAAT TTGCCGTCTT CCCCGAACTG GTATACCAGA AAGGATTGCT CTCCACTCCT
TTTCACCGGG TCTATTTTAC AGAACAGAAT GCCCCAAGAG TGGAAAACCT GCCACGTGAG
CGGTGGAAGT TCCCCATTGG GTTACAATTC AATCTCTTCG TCGGTCAGCG TACCATTATC
CGCTCCTACT ATCGTTTTTA CCACGATAAT TTTGGAATCA CCGGCCATAC GCTCCAGCTG
GAAGTACCTG TAAAAGCCAC ACCACAGCTG ACAATTTCCC CTTTATTCCG CTTTTATACC
CAGACGGAAG CGAAGTATTT TAAGCCTTAT AAAACACATC AGCTCCGGGA AAGCTACTAT
ACGTCCGACT ATGACCTGAG TCACTTCAAC AGTTATAAAG CGGGAATCAA TGCCCGCTAC
GCACTGTTCA AACAGTTGTC CAGACACTAT TCCTTCCAGG AAATCGGGCT CCGGTATGCG
TTCTACAAGC GCTCTGACGG TCTATCGGCA CATATGATAT CCTTACTGCT GGACTTTAAA
CGCAGTAAGG TATAG
 
Protein sequence
MKRLFIAAGL LAAYFSASAQ QKTDSSAYKK QQVSQTDIQV LFSFYTQDGK HSAVTGGIGT 
ENLQVYATDV SITHRPDLRN TYYLGLGIDM ITSASTDNID FVKSSASRHD NRFHLNAGYS
RQLKKPNIRV GINSGLALES DYLSVPLGVS VEHDNADHSR QWSAGLQCYF DDLRWGRFDP
DYYSPETLVY PSELRDTAWF DIYRRTSYNL NLALYQVVNQ RMQFAVFPEL VYQKGLLSTP
FHRVYFTEQN APRVENLPRE RWKFPIGLQF NLFVGQRTII RSYYRFYHDN FGITGHTLQL
EVPVKATPQL TISPLFRFYT QTEAKYFKPY KTHQLRESYY TSDYDLSHFN SYKAGINARY
ALFKQLSRHY SFQEIGLRYA FYKRSDGLSA HMISLLLDFK RSKV