Gene Cpin_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1593 
Symbol 
ID8357735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1939774 
End bp1940061 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content49% 
IMG OID644963773 
ProductExcinuclease ABC C subunit domain protein 
Protein accessionYP_003121290 
Protein GI256420637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.758459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACCG TTTATGTCCT ATTTTCCCGC CAGTTCGAGA AAGTTTATAC TGGTCACACC 
TCAGATCTCG TGAAACGTTT TCATTTTCAC AACACATATG GCCGTCAGAA AGGTACCTGG
CCTTTTCGTC CCTGGGAGGT CGTCTACACC GCCCATTTCG AAGATAAACA GCTGGCACTC
AGGTATGAGT GGTTGCTGAA ATCAGGGAAA GGCCGTGCAT GGCTGTGGAA CCGTATCAGG
GAGGAGTATT ATAGAGATGG GTATATTAGT GGCGTGGTGC CGGAGTGA
 
Protein sequence
MYTVYVLFSR QFEKVYTGHT SDLVKRFHFH NTYGRQKGTW PFRPWEVVYT AHFEDKQLAL 
RYEWLLKSGK GRAWLWNRIR EEYYRDGYIS GVVPE