| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1589 |
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| Symbol | |
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| ID | 8357731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1932031 |
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| End bp | 1935525 |
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| Gene Length | 3495 bp |
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| Protein Length | 1164 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963769 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003121286 |
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| Protein GI | 256420633 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.318649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAA GACCGCTACC CATGCGTTTT TCAGGAATTT TCCGCTCGTT GTTCCTCCCG
CTGCTCGTCT GCATGGCTTT ATTGAGCATG CTTGACCTGA AAGCACAGAG TGCATTTGCT
GCTGATGCAA ATCACCCTGT CTACAGTCAG GGACAACAGG TAAAAAAAGA TACTGAACTC
CCTTTTGAAA GCCGTATCAG TCTGCAGGTA AGCAATGAGC AACTTGCACA GGTACTGGAG
AAGATCGAGA AACAAACCTC CTATGTGTTT GTCTATTCAA ATGATGAAAT CGGCGCTGCC
CAGAAGATTT CCCTGTCTGT AAAGGACAAG AAACTGGGAG AAGTACTGGA AATGGTACTT
GCTCCGCTGG AGATCAAATT TGAAATGATC AATAACAAGA TCATTCTGCG TCAGCAGGCG
GCAGCCACCA TTATGCAACA GGCCGATATC ACGATCAATG GCCGGGTCGT TAATAATAAG
GGAGAAGGTA TCCCTGGTGT GAATGTTCGT TTGCAGGGTT CCAGCATCGG TACTTCTACA
AATGATCAGG GTTTTTTTAC GTTAGAGATC CCGAATGGGC AAGCCAATGG TACCTTAGTT
TGCTCTTCCG TTGGCTTCAT CCCATCGGAA GTAGGGATCA GCGGAAGAAC CAACATTACC
GTAATGCTCA CTGAAGACTC TAAGGACCTG GGAGAAATAG TGGTTACCGC TTACGGCACA
CAAAAGAGAA CGCAGGTAAC GGCGGCTATC AATACCATCT CCACTAAAGA TATTGAAAGC
CGTCCTGTTA CAAACATGTT TCAGGCTTTA CAGGGCACCG CGCCCAACCT TATTCTGCAA
CAGAATACAG CAGAACCAGG TGCGCAGATG ACCCTCAATA TCCGTGGTGT AGGTAGTCTT
ACCGGCAACT CTCCGTTGAT CATCATCGAT GGCGTACAAG CCGGAAAAGA TGGTCTGCAG
AATCTGAACC CCTATGATGT GGAAAGCATC TCCGTATTGA AAGATGCGGC TTCTTCCGCG
ATCTACGGTT CTCAGGCTGC AAACGGTGTT ATCTATATCA CTACAAAAAG AGGTTCCAAG
GACGAAAAGA CTTCTGTTAC CTACAACGGT ATGTATGGTT TCCAAACACC TACTACATTG
CCCCGCAACG TAGAAGCCTG GGAATATATG ACGCTGAAAA ACGAAGCGCT GGTGAACTCC
GGTAAAACGC CGCAGTACGC TCCCGAAGAT ATCAGCTACT GGCATCAGCG TGGTTCTGAA
CCAGCTTATC TGAAAGAAAT GCTGCGCAGC AGCACTCCTC AGCAGAACCA TAGTCTCAGC
ATGACAGGTG GTGGCAAAAG CAGCAGCTAC CTGGTATCCC TCGGTTATGT GGATCAGGGC
AACATGTTAC AGAACTCCTA CGTATCAGAA GACTTCTATT ACAAACGCTA CAATGCAAGG
GCTAACCTCG CAGTAGATGT GAGTAAATAT GTGAAAGTAA ATGTAAACCT TGCATATACA
AAAGGTATCA AACGCAGACA GCAGGCTGAT ATTGGCTTCC TGATCCGCGA TGCGATCCGT
ACGCCGCGTA TCTATCCTGT ACAGGATTCA CTGGGCAACT TCGTAGTGCC TTCCCTGAAC
AGTAACAACG TAATTGCGCA GCTGAAATAC GGTGGTTTCA ACAAAGAAGA AAAAGATAAC
CTCCTGGGAG GTCTGGATAT TACCGTAACA CCGGTGAAGC ACTTCAAACT GAACTTCAAC
GCTTCCGGTA CTTATACTAT TACCAATCAG CAGGAACGCC AGAACAAGTA TTCTTACGCA
CCATATTATA CTACCGCTAA TCCTCCGCTG TACAACAAAA TGTACGAGTA TGAGTTCAAG
GACCTCGCTT CCAACATATA TGCGACTGCG GAATATGAGA ACACCTTTAA CAAACACTAT
ATCAAAGCGC AGGTCGGCGG ACGTAGCGAT GCCAACAACG AAGAGTACGG TGTGAAAGCG
ACCCGTTATG GTAGTACAAA TCTGGATGAC GACTGGACCA TCGGTGGTGG ATACATTCCT
AAACCAGACG GTACTTTCGA TTACGCCAAC ATTGGTACTT ACAACGATAT CATCAACCCG
AACCTGTATG CGCTGAACTC TGTTTTCGGC AGAGTGAACT ACGCATTCAA TGACAAATAT
TTGGCTGAAT TCACCTGGCG GTATGATGGT TCTTCCAAAC TGGCTCCTGG TCACCAGTGG
CAGTTCTTCC CGGCCTTCTC TCTGGGTTGG AGGATTACAG ATGAGGACTT CTTCGGTGAT
TTCAAGAAAC GTTTTGGTAA CGTGAAATTC CGTTATTCAT GGGGACAGGT TGGTAACTCC
AACATCGGTG GCTTCAACTA CCTGGCGAGA GTTACCCTGA ACAGTGGTAA ATATCCATTC
AACAATACAC CAAATACCGG TGCTGATTTC TCAGCCTACA ATGAAACATT GCAGTGGGAA
ATTTCTACTA TGAGTAACTA TGGTGTGGAT GTAGACCTGT TCAATAACAA GATCAACGCA
TCCTTCGACT ACTTTAATAA AAACACAAAT GGTATCTACC TGTTCCAGGT AGTGCCTGGT
ACAGCCGGTA TAGGCGCCTC CCTGCAGAAC GTTGGTAAAG TGCAGAACAA AGGTTGGGAG
CTGACGGTTT CCTATCATGC AAAAACAGGT GCGGTAAATC ATACGATCTC CGGTAATCTG
TCAGATAACC TGAACAAAGT GGTGAAATAT GGTGAGCAGT CCGTACAGGG ATCTGACTTT
GCCTTCATCA TCAAAGAAGG TTTCCCGATC GCATCCTACT ATGGTTACAA ATCAAACGGT
CTGTACCAGA ACCTGGATGA TATCAAAAAT GCACCAAAAG TACCTTTCGC TTACAACCAG
CAGGTAATGC CGGGTGATGT AAAATACATC GACCGCAATG GTGATGGTGT GATCGATGCC
GACGACCGTT ATGTATTCGG TAATCCATTC CCACGTTACA CTTTCGGGTT TAGTTATGCG
GCTAACTGGA AAGGCTGGGA CTTCTCTATG TTCTGGCAGG GTGTGGGTAA AAGAGGCCAG
TTCCTCCGTG GTGATATCGT AGAGGCCTTC CATAACAACG AAGATCACGC TTTCGAACAA
CACCTGGATC GCTGGACGCC TACCAATCCG GACGCTTCTT ATCCACGTCT GACCATCGGT
AATGCAGATG CGAACAACTT CGCTTATTCT GACTACTGGT TGTTCGATAC CAAATACCTG
CGTTTAAAGA ACCTGCAGTT TGGTTATACA CTGCCTCGTA GCGTAAGCCA GTTGCTGCAT
ATCCAGAATG CAAGAGTATA TTTCACCGGA CAGAATATCC TCACCTTCAC GCCACGTCGT
TTCCGCGAAC TGGGTGTAGA TCCGGAATTT ACACAGTTTG ACGATAAACT GTCCTTTACC
AATTACAACG CTATTGCAGG ACGTAGTTAT CCGAATGCAG CTACTTTCTC ATTTGGCCTG
GATCTGAAAT TCTGA
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| Protein sequence | MKERPLPMRF SGIFRSLFLP LLVCMALLSM LDLKAQSAFA ADANHPVYSQ GQQVKKDTEL
PFESRISLQV SNEQLAQVLE KIEKQTSYVF VYSNDEIGAA QKISLSVKDK KLGEVLEMVL
APLEIKFEMI NNKIILRQQA AATIMQQADI TINGRVVNNK GEGIPGVNVR LQGSSIGTST
NDQGFFTLEI PNGQANGTLV CSSVGFIPSE VGISGRTNIT VMLTEDSKDL GEIVVTAYGT
QKRTQVTAAI NTISTKDIES RPVTNMFQAL QGTAPNLILQ QNTAEPGAQM TLNIRGVGSL
TGNSPLIIID GVQAGKDGLQ NLNPYDVESI SVLKDAASSA IYGSQAANGV IYITTKRGSK
DEKTSVTYNG MYGFQTPTTL PRNVEAWEYM TLKNEALVNS GKTPQYAPED ISYWHQRGSE
PAYLKEMLRS STPQQNHSLS MTGGGKSSSY LVSLGYVDQG NMLQNSYVSE DFYYKRYNAR
ANLAVDVSKY VKVNVNLAYT KGIKRRQQAD IGFLIRDAIR TPRIYPVQDS LGNFVVPSLN
SNNVIAQLKY GGFNKEEKDN LLGGLDITVT PVKHFKLNFN ASGTYTITNQ QERQNKYSYA
PYYTTANPPL YNKMYEYEFK DLASNIYATA EYENTFNKHY IKAQVGGRSD ANNEEYGVKA
TRYGSTNLDD DWTIGGGYIP KPDGTFDYAN IGTYNDIINP NLYALNSVFG RVNYAFNDKY
LAEFTWRYDG SSKLAPGHQW QFFPAFSLGW RITDEDFFGD FKKRFGNVKF RYSWGQVGNS
NIGGFNYLAR VTLNSGKYPF NNTPNTGADF SAYNETLQWE ISTMSNYGVD VDLFNNKINA
SFDYFNKNTN GIYLFQVVPG TAGIGASLQN VGKVQNKGWE LTVSYHAKTG AVNHTISGNL
SDNLNKVVKY GEQSVQGSDF AFIIKEGFPI ASYYGYKSNG LYQNLDDIKN APKVPFAYNQ
QVMPGDVKYI DRNGDGVIDA DDRYVFGNPF PRYTFGFSYA ANWKGWDFSM FWQGVGKRGQ
FLRGDIVEAF HNNEDHAFEQ HLDRWTPTNP DASYPRLTIG NADANNFAYS DYWLFDTKYL
RLKNLQFGYT LPRSVSQLLH IQNARVYFTG QNILTFTPRR FRELGVDPEF TQFDDKLSFT
NYNAIAGRSY PNAATFSFGL DLKF
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