| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1578 |
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| Symbol | |
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| ID | 8357720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1919767 |
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| End bp | 1920906 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644963758 |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_003121275 |
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| Protein GI | 256420622 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.998372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGC ATCTTTTCGC AGCAGCTGCT TTGCTAAGTA TCGGCAGTTA TCTGCCAATG
CAGGCACAGC AGGCGCTGCC GCCAAAAAAG GAGACCCTCA AAACCCTGAC CCTCGTTAAC
CGTTATTTTA TGGAAAAATG GCCGGATGCC GGCAAAGACA TCGTATTGAA AAAGACCTGG
CCTTCTCACA TCTGGACCAG GGCTGTCTAT TACGAAGGTC TGATGGCCCT CTACCAGATC
GATCCGCAGC AAAGCTATTA CGACTATGCC GTACAGTGGG GTGATAAGCA CAACTGGGGC
CTCCGTGGAG GTATTACAAC CCGCAATGCC GACAACCAGG CCTGCGGACA AACATATATC
GACCTCTACC TCCTCGATAA AAAGCAACAC GATAACCGTA TTCACGATAT AAAGGCATCT
ATCGATACAA TGATGCTCAC CGACGTGATC GATGACTGGG ACTGGATAGA CGCCATTCAG
ATGGCCATGC CCGTAATGGC GCGATTGGGT AAGCTCTATA ATGACACTGC CTATTATCAT
CGCATGTATG AGATGTATGC CTACACCAAA TACAAGCACG GCACAGAAGG GCTGTACAAC
CAACAGGAAC ATCTCTGGTG GCGCGACAAA GATTTTGTGC CTCCCTACAA AGAGCCCAAC
GGAGGCAATT GTTACTGGAG TCGTGGCAAT GGCTGGGTAC TGGCCGCCCT GCTAAGAACA
ATGGAACAGC TCCCACAAAG CTCTCCCTAC TACAAGATCT TCCTGCAGGA CTTCAAAGAT
ATGTCAGCTG CTATCCTTAA ACTCCAGCGC CCTGACGGCT TCTGGAATGC CAGTCTCCAT
GATCCCACCA ATTTCGGCGG AAAGGAACTG ACCGGCACCT CCCTTTTTGT ATATGGTATG
GCCTGGGGCG TACGCAAAGG CTATCTTGAC AAGAAAACCT ATCAGCCCGC CATCACTAAA
GCGTGGAACG CGCTCACCAA AGAATGTGTA CACGACAACG GTATGCTTGG CTACGTACAA
AGCACCGGAA AGCAACCCTC CGACGGCCAA CCCGTTACCT ACGACAAGAT TCCCGACTTC
GAAGACTATG GCCTGGGCTG TTTCCTGCTC GCCGGCTCTG AAATCTACAA GAGTAAATAA
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| Protein sequence | MKMHLFAAAA LLSIGSYLPM QAQQALPPKK ETLKTLTLVN RYFMEKWPDA GKDIVLKKTW
PSHIWTRAVY YEGLMALYQI DPQQSYYDYA VQWGDKHNWG LRGGITTRNA DNQACGQTYI
DLYLLDKKQH DNRIHDIKAS IDTMMLTDVI DDWDWIDAIQ MAMPVMARLG KLYNDTAYYH
RMYEMYAYTK YKHGTEGLYN QQEHLWWRDK DFVPPYKEPN GGNCYWSRGN GWVLAALLRT
MEQLPQSSPY YKIFLQDFKD MSAAILKLQR PDGFWNASLH DPTNFGGKEL TGTSLFVYGM
AWGVRKGYLD KKTYQPAITK AWNALTKECV HDNGMLGYVQ STGKQPSDGQ PVTYDKIPDF
EDYGLGCFLL AGSEIYKSK
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