Gene Cpin_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1576 
Symbol 
ID8357718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1916366 
End bp1917427 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content48% 
IMG OID644963756 
Productpeptidase T2 asparaginase 2 
Protein accessionYP_003121273 
Protein GI256420620 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1446] Asparaginase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA TCTCCTTTCT CCGATCAGCC ACCTGGCTGC TGATCATGTG CAGCAGCATA 
CGGGCAGGCG CCCGCAATAT CGTCCATGAA GACAGTCTCC ACCAGGAAAA ATATGTACTT
GTAATACATG GCGGGGCCGG CACTATCCTG AAAAAAAACA TGACGCCGCA AAAGGAAGCC
GCTTACACTG CTGGTTTACG CGATGCGCTG AATGCGGGCT ATAAAGCGAT ACAGGCAGGC
AAAAGCAGTC TGGATGCTGT GGAAGCTACG ATCAGGGTGC TGGAAGATAA TCCGTTGTTT
AATGCAGGTA AAGGCGCTGT ATTCACACAT GACGGACGCA ATGAAATGGA TGCTGCCATT
ATGAATGGAA AAACGCTGGA AGCGGGTTCT GTAGCGGGTA TATCAACGAT CCGTAATCCT
ATATCAGCAG CAAGGGCGGT GATGGAAAAA TCAGAGCATG TGATGATGAC CGGTCGCGGA
GCAGAGCAGT TTGCGAAAGA AGCCGGACTG GAAATAGTAG ATCCCTCTTA TTTCCGTACA
CAGGAGCGTT GGGATGGATT ACAGAAAGCA CTAAGGGAAG ATTCAATTAA AAGTAAGCTG
GATCACAGTT ACCATCCTGC CGGCAAACTG GGCGTTGAGA ATATCGATAA CAAGTTTGGT
ACGGTGGGCG CTGTGGCACT GGACAAAGCG GGTAATCTGG CAGCGGGAAC ATCTACCGGT
GGTATGACCA ATAAGAAATA CGGTCGTGTG GGAGATGCGC CTATTATTGG TGCAGGTACT
TATGCTAACA ATAATACGGT GGCTATTTCA TGTACCGGAT GGGGTGAGTT TTTCATTCGT
AGCGTAGTGG CACATGACCT TTCTGCGCTG ATGGAATACA AAGGGTTAAC GGTACAGGAG
GCCGGAAAGG CCGTGATAGA TAAAGTAGGC AAACTAGGTG GTAATGGTGG ATTGATTGCG
TTGGACAAAG AAGGGAATGC TGCGCTTCCT TTTAATACGG AGGGGATGTA CAGGGGCATG
GTCACTGCCG ATGGTAAGAT CACAATTGAG ATCTACAAAT AA
 
Protein sequence
MKTISFLRSA TWLLIMCSSI RAGARNIVHE DSLHQEKYVL VIHGGAGTIL KKNMTPQKEA 
AYTAGLRDAL NAGYKAIQAG KSSLDAVEAT IRVLEDNPLF NAGKGAVFTH DGRNEMDAAI
MNGKTLEAGS VAGISTIRNP ISAARAVMEK SEHVMMTGRG AEQFAKEAGL EIVDPSYFRT
QERWDGLQKA LREDSIKSKL DHSYHPAGKL GVENIDNKFG TVGAVALDKA GNLAAGTSTG
GMTNKKYGRV GDAPIIGAGT YANNNTVAIS CTGWGEFFIR SVVAHDLSAL MEYKGLTVQE
AGKAVIDKVG KLGGNGGLIA LDKEGNAALP FNTEGMYRGM VTADGKITIE IYK