Gene Cpin_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1574 
Symbol 
ID8357716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1915402 
End bp1915827 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content46% 
IMG OID644963754 
ProductYiaAB two helix domain protein 
Protein accessionYP_003121271 
Protein GI256420618 
COG category[S] Function unknown 
COG ID[COG4682] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGA AACCGTCACT TGCCTTTATT GCTACCTCCT GGCTCGCATT ATTGATTGGA 
GTGGTAGGTT ACGTAATTGG GCTGTGGAAC GCAGCAATGC AGCTCAATGA AAAAGGCTAC
TATTTTACCA TACTCATGTA TGGTTTGTTT GCAGGCGTCT CTGTACAGAA ATGTGTAAGA
GACCGTCTTG AAGGTATCCC GGTAACAGAC ATCTATTATG GCCTTAGCTG GGTATCGACC
CTACTCTGCA TCGTTCTGCT GACAGTAGGT TTATGGAATG CGACATTATT GCCAAGTGAA
AAAGGTTTTT ACGCCTTCGC CTTCCTGCTG AGCATCTTTG GTGCGATCAG TGTACAGAAA
AACACACGCG ATACGCAGGC TGCAAAAGCC GGTATCGGAA CCATAGACAC AATTGCTGAA
AGGTAA
 
Protein sequence
MKQKPSLAFI ATSWLALLIG VVGYVIGLWN AAMQLNEKGY YFTILMYGLF AGVSVQKCVR 
DRLEGIPVTD IYYGLSWVST LLCIVLLTVG LWNATLLPSE KGFYAFAFLL SIFGAISVQK
NTRDTQAAKA GIGTIDTIAE R