Gene Cpin_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1573 
Symbol 
ID8357715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1914929 
End bp1915282 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content42% 
IMG OID644963753 
ProductS-adenosylmethionine decarboxylase related 
Protein accessionYP_003121270 
Protein GI256420617 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1586] S-adenosylmethionine decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTACA ACAAGGGAAC CCACTTGATT GCGACCCTGT ATACAACTGA GCATCAACTA 
CTTAATACTT TTGAAGCATT CAGAATATTG ACAGATGACC TCATTAGGAC ACACCAGCTG
CAAAAGCTGG GAGAAGTATA CCATAACTTC AGCCCTTCGG GTTATACCGG TGTCGTATGT
CTGAGTGAAA GCCATCTTTC AATACATACC TGGCCGGAAC ATGGCAAGAT CAATATTGAT
ATATACCTGA GCAATTATCT CCGGAATAAC GACGGTACGG TAGATAAACT ATACAGCGCG
ATCAAAGATC ATTTTAATGC GACTGTCGAA CTGGAACAAT TCCTCAAACG CTAA
 
Protein sequence
MHYNKGTHLI ATLYTTEHQL LNTFEAFRIL TDDLIRTHQL QKLGEVYHNF SPSGYTGVVC 
LSESHLSIHT WPEHGKINID IYLSNYLRNN DGTVDKLYSA IKDHFNATVE LEQFLKR