Gene Cpin_1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1565 
Symbol 
ID8357707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1906489 
End bp1907700 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content43% 
IMG OID644963745 
Producthypothetical protein 
Protein accessionYP_003121262 
Protein GI256420609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAA AAGTGTCAGT TACGGATACG GGAATCCAGT CTTCCGGTCT TCCGAAGGAC 
TACATGGAAG CTGTGGCAGA GTATATCTGG AACGGGTTTG ACGCCGCTGC TTCTGTGATA
GACATATATT TTGAATCCAA CGAAATCGAT ACCATTCATA GTTTATCCAT AACAGACAAT
GGCTCCGGCA TTGACTATGA TCTGTTAAAA GAGACTTTCG GCCATTTTAA TGACTCCATT
AAAAAAGCCT CTTTTCAGAA AACATCCTCC TTCATCAAAG GAAATAAAGG TCGTGGCCGC
TTTTCATTCT CCGCATTCAG CGGGAAAGCG GTATGGCATA CTGTCTATAA AGAGGATAAA
ACCGGCAGCA TGATGGAATA TGATATCACC ATCAGCCGCA ACGCAAAAGA CTTCTATGAT
CCTGATGGAA AGAAAACAAC GGTTAAGAAA GCAACCGGTA CCACCGTTAC CTTTTACGAC
CTGTTTGAAG TATCTGGATT TTCCTTTGAA TCAGATGAAT TTAAGAGCTT CCTGATCCGT
GAATTTGGTT GGTTCCTGAT GCTGAACAGG GAAAAAGAAT ACCAGATCCG TATCAACGGC
GTAGCGCTGG ATTATCAGGC CGCCATTGCA GAAAGCGATA CGGGTGTATT GTCCAGGAAA
GATGCAGAAG GGAACGAACA CTATTTCAGG ATCACTTTTG TCAGATGGTC CGAAAGGATA
GGGGATAAGT TTTTCTTCTA TTTCCTGAAC TCCGGACAGT CAGAAGTATT CAAAGACCTG
ACCTCTTTCA ATAACAATGC GATTGGCTTC TACCATAGCG TATATGTGGA GTCCCGCTAT
TTTGACGCTT TCAATTCCCG TGATGCAGAA CAAACGGAGA ATATGTTTGA GCGTACCAGA
CAGCATAATG TCTTCCGCGA AGTGATGAAC CATCTGCATG AACTGGTAAG ACTGAGACAG
AAGGCTTTTG TAAAAGGAGA AGCAGCTGTG AAACTGCTGG ACATTTATGA AAAGAATGGG
GTTTTACCTG ATACAGGCAA CAGAAGAGAA CTGAAAAAGT TCCTGAAAGG CATCTTCGCC
ACAGAACCAA GACTGTTTCA GGGCTTAAAT AAAGAGCAGC AACGTGTATA TCTCGGTATG
ATAGATATCC TCTTGCAGAA CGGTAAAAAA GAGGATCTGC TCGCGCTGGT CAACCAGGAA
ACAGAAGCTT AA
 
Protein sequence
MKEKVSVTDT GIQSSGLPKD YMEAVAEYIW NGFDAAASVI DIYFESNEID TIHSLSITDN 
GSGIDYDLLK ETFGHFNDSI KKASFQKTSS FIKGNKGRGR FSFSAFSGKA VWHTVYKEDK
TGSMMEYDIT ISRNAKDFYD PDGKKTTVKK ATGTTVTFYD LFEVSGFSFE SDEFKSFLIR
EFGWFLMLNR EKEYQIRING VALDYQAAIA ESDTGVLSRK DAEGNEHYFR ITFVRWSERI
GDKFFFYFLN SGQSEVFKDL TSFNNNAIGF YHSVYVESRY FDAFNSRDAE QTENMFERTR
QHNVFREVMN HLHELVRLRQ KAFVKGEAAV KLLDIYEKNG VLPDTGNRRE LKKFLKGIFA
TEPRLFQGLN KEQQRVYLGM IDILLQNGKK EDLLALVNQE TEA