Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1557 |
Symbol | |
ID | 8357699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1901077 |
End bp | 1901898 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644963737 |
Product | putative signal transduction histidine kinase |
Protein accession | YP_003121254 |
Protein GI | 256420601 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCT CAACATTCGC AACCTCTCTG ACCATCATCA TATCAACTCT GCTTGTTATG AGTCTCAGTG CGGCCGTTAT TTATTTCCTG TTTCTTTATC AGAAGAAAAA ATTCCGACAT CAACAGGAAC TGATTGAAAT GCGGGAGGCA TTTAACCATG TCTTACTTCA GTCAAAGCTT GCGATACAGG AGCAAACGCT TAACCATATA TCAAAAGAGT TACACGCCAA CTTTAGTCAC CTGGTGTCCC TGATTAACAT TAATCTTTCT GAAATATTGC CCAAAAGTCC GGCAGGACAA AGGGAGAATA TCCTTGAAAC AAAATCACTG GCTAAACAGC TTATGAGCGA ACTAAAGGCG CTCAGTGCCA ATCTCAATAC CGATCATATC ATTCATATAG GATTTGTACA GGCATTACAA AATGAGCTGA ACAGACTTGC GAAGACCGGC AGATATGATG TCAGTATTAC AAAAACCGGA GAAGAATACC GGATGCAGCC AGAGCATGAA ATCATCCTCT TCCGCCTCTG TCAGGAGGTA CTCAATAACG TAGTGAAATA TGCGAGAGCA TCCAAAGTAA TTTCGAAACT CTCCTTTTCA AATGATAATT TCATTCTGAC TATTGCCGAC AATGGCGACG GATTTGACAT TGATCAGGCG CTTCAGCAAA GCGGAGAAAA ACAAAGCACC GGTTTGCTGA ATATGCGTAA AAGAGCATCG CTTATTAATG CTGATCTGAA TATTACAAGT CACAGCGGAG ACGGCACTAT CGTTACCATT AATATTCCCC ATCCTCAAAT ACTAAAAACT TATGCTGTAT GA
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Protein sequence | MQTSTFATSL TIIISTLLVM SLSAAVIYFL FLYQKKKFRH QQELIEMREA FNHVLLQSKL AIQEQTLNHI SKELHANFSH LVSLININLS EILPKSPAGQ RENILETKSL AKQLMSELKA LSANLNTDHI IHIGFVQALQ NELNRLAKTG RYDVSITKTG EEYRMQPEHE IILFRLCQEV LNNVVKYARA SKVISKLSFS NDNFILTIAD NGDGFDIDQA LQQSGEKQST GLLNMRKRAS LINADLNITS HSGDGTIVTI NIPHPQILKT YAV
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