| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1552 |
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| Symbol | |
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| ID | 8357694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1894702 |
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| End bp | 1897788 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963732 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003121249 |
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| Protein GI | 256420596 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAA GAAATGTAAC ACTCGTGCTT GCGCTGCTTT TTAGCACGGC GCTTTTTGCG
CAGCAAACAC AAATACGGGG GCAGGTGCTC GCTGCTGAAA ATAGGCAGCC TTTGCCGGGA
GTGACAGTAA AAATTAATCG TACTACATTA GGTACTACTA CAGATCAGGG AGGACATTTC
CAACTGACAG TCCCTTCCAG CAAAACCGTT ATATCAGTAT CCTCTATTGG CAGAGAAACA
ACAGAAACAG AGGTACGCAA CGGAGATCAA AATATTGTAA TCCTGCTTAA ACCTGCTAAC
ACGACACTTG GTGAAGTAGT AGCGGTGGCC TATACGAATG TAAAACGTTC CGGATACCCG
GGAGCTGTAG CAACTGTAAG CTCTGACAAA ATCAATAACC GCCTTACCCC CAACGTTACC
AACGCATTGC AGGGATTAGT GACCGGTTTG CAGACGACTT CTTCTAATGG TCAGCCGGGC
AATAGTTCTA CCATCCGCAT ACGTGGCGTT GGTTCTATTA ATGCCTCCAG TGCGCCTCTG
TTTGTAGTAG ATGGCGCTCC TTATGATGGA GATATCAATG CTATCAACGG CGCTGATATA
GAATCTATCA GTGTATTGAA AGACGCAACT GCCGCTAACC TGTACGGTTC GCGTGCCGCT
AATGGCGTAA TTATCATCAC TACCAAGCAG GGTAAAAAAG GTGAGTCCGC CGTGAATATC
AACTTCAACC AGGGATGGAG CAGCCGTGCA GTAAAAGACT ATGATAAACT TAACACTGAT
CAGTACTTTG AACTCTACTG GGAAGCATTA CGCAATAAAC AGCTTACCAA TGGTCAATCT
GCTGCTCAGG CAGCCGCAAC CGCCAGTGCA CGCGTAGTTT CTGATCTGGG TATCAATCCT
TTTGGTCCTA CTTTCCCTCA GCCTGTTGGT ACGGATGGAA AGATCGTAGC GGGTGCGCAT
CCTTTATGGA ACGACGACTG GGAAAAAGGT ATACAGCAAT CCGGAAAATA TACACAGGCA
CAGCTTAGTT TCAGCGGCGG TAGTGATAAA TCCACTTATT ATGTAAGTGG TGGTTATGTT
AATAACGAAG GTGCTTATAT GGGTTCCGGT TTCAAACGTT ATAACTTCAA AAGTAATATC
ACCTTACAGG CAAAATCCTG GTTAAAGACA GGATTGAATC TGAGTGGATC CAGCGCTGCG
CAGGATTATC CGGCGTCATC TGACTCACGT ACAGATAACG TCGTATTGTT TGGCAGGACT
GTTCCAGGCT TCTATCCTAT TTACCAGCGG AATCCTGATG GCACCTATCT GTTGGATGCC
AGTGGCCAGA AGCTATTTGA CTATGGCGCT TATCGCCCCT CTGCAGCACT GGCCCGCGAA
AATCTGATCG GGTCTTTGCC GCTGGATAAA AACAGGAATA CCAATGAGAA CCTGTCTGCC
AGAACATTTG TGGAAGCAGC TCTTACAAAG GCACTACATA TCAAGACCAG TTACAACGTT
GACTATGTAA ATACCAACGC CCTGTTTTAC ACCAACCCGC TGGTAGGCGG CGACGCAGAA
ATAGGCGGTG CTATCAGTAA AAGCAATGGC AGAAGGTTAA GTTATACATG GAACAACATC
CTGACCTATG ATGCAGATCT TTTGGGCGGA CATCACCTCA ATCTCCTGGC TGGTCATGAA
TACTATTATT TCAATTCCAG TTCACAGAGT GGTAGTCGTC AGAAATTTGC CTTACCTGAT
TTGTACGAAC CAGCTGCAGC CTCTCAGTTA AATGACTTTA CCGGTGTTTC TGATAACTAT
GCGAAACTGA GTTTCTTTGG TCAGGGACAA TATAACTACC TGAACAAATA CTATTTAACC
GCCTCTGTAA GAAGAGATGG ATCTTCCCGC TTCTCTCCTG ATTCCCGTTG GGGAACATTC
TGGTCGACAG GTGCTTCCTG GCGTTTGTCA GAAGAGCAAT TTCTTCGTTC TGTAAGCTGC
TTGAATACCC TCACCTTGAA GGGTAGCTAT GGTGCATCTG GTAATGACAA TTTAAGCACA
TACTATGCGT ATCTCGCTTT ATTCGATATC AAGAATAACC TGGGTAACGG GGGTGTTATC
ACATCCAGAC TGGCTACTCC GGGTCTGAAA TGGGAAAGTA ATCTGAATCT GAATATTGGT
CTGGATTACG CATTATTTGA CAATCGTCTG TATGGTAATA TCAACTACTA TAACAGAACC
AGTAAGGACC TCCTCTATGC AAAACCAATG GCTTCTTCAA CAGGTTTCAG CTCTATCAGC
GCTAACATCG GAGCGTTGCG CAATACCGGT CTGGAACTGG AACTGAATGT CATACCTATC
CAAACCCGCG ATTTCAAATG GAATATCGGA CTGAATGTAG CGCATAACAA GAATAAGATC
ACTGAGCTGC CACAGAAGGA AATCATCAGT GGTACTAAAA AGCTGACGGT AGGAAGTTCT
ATCTATGAGT TCTATCTGCG TGAATGGGCG GGTGTAGATG CAAAGACGGG TAATCCGCTC
TGGTATCAGA CGGACGCCGA AGGCAAGAAA GTGACTACCA CTAATTATGC TTCCGCTACG
CAATATTATG CAGGTTCTGC ATTGCCTGAT GTTACAGGTG GTATTACCAA CAGCTTCAAT
TATAAAAACT TTGATCTGTC TTTCCTCCTG TCTTATAGCA TAGGCGGTAA AGTACTGGAC
CTGGATTATG TATCTCTGCT GAGTGGCGCT ACCAGTCCAG GCCGTAACTG GTCAACAGAA
TTACTGGAAC GCTGGACGCC GGAACATACC AACACGGATG TTCCGCGTTT TACCACGGAT
AACCTGAACT GGACCTCTAC CTCTACCCGT TTCCTCTACA GCGCTACTTA TGCCCGTCTT
AAAACGGTAT CCCTCGGATA TTCGCTGCCA AACAGGTTAT TGTCCCGAAT TGGTATTAAG
AGCGCTAAAG TATATGGTCT GGGTGAAAAC CTCCTGACCT TCTATGGTCA CAAAGGCATG
GATCCGGAGC AGTCTATAGA TGGTACCACT TACTATCAGT ATCCTGCGAT GAAAACATTC
TCAGTAGGTA TACAGGTGGG ACTTTAA
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| Protein sequence | MFKRNVTLVL ALLFSTALFA QQTQIRGQVL AAENRQPLPG VTVKINRTTL GTTTDQGGHF
QLTVPSSKTV ISVSSIGRET TETEVRNGDQ NIVILLKPAN TTLGEVVAVA YTNVKRSGYP
GAVATVSSDK INNRLTPNVT NALQGLVTGL QTTSSNGQPG NSSTIRIRGV GSINASSAPL
FVVDGAPYDG DINAINGADI ESISVLKDAT AANLYGSRAA NGVIIITTKQ GKKGESAVNI
NFNQGWSSRA VKDYDKLNTD QYFELYWEAL RNKQLTNGQS AAQAAATASA RVVSDLGINP
FGPTFPQPVG TDGKIVAGAH PLWNDDWEKG IQQSGKYTQA QLSFSGGSDK STYYVSGGYV
NNEGAYMGSG FKRYNFKSNI TLQAKSWLKT GLNLSGSSAA QDYPASSDSR TDNVVLFGRT
VPGFYPIYQR NPDGTYLLDA SGQKLFDYGA YRPSAALARE NLIGSLPLDK NRNTNENLSA
RTFVEAALTK ALHIKTSYNV DYVNTNALFY TNPLVGGDAE IGGAISKSNG RRLSYTWNNI
LTYDADLLGG HHLNLLAGHE YYYFNSSSQS GSRQKFALPD LYEPAAASQL NDFTGVSDNY
AKLSFFGQGQ YNYLNKYYLT ASVRRDGSSR FSPDSRWGTF WSTGASWRLS EEQFLRSVSC
LNTLTLKGSY GASGNDNLST YYAYLALFDI KNNLGNGGVI TSRLATPGLK WESNLNLNIG
LDYALFDNRL YGNINYYNRT SKDLLYAKPM ASSTGFSSIS ANIGALRNTG LELELNVIPI
QTRDFKWNIG LNVAHNKNKI TELPQKEIIS GTKKLTVGSS IYEFYLREWA GVDAKTGNPL
WYQTDAEGKK VTTTNYASAT QYYAGSALPD VTGGITNSFN YKNFDLSFLL SYSIGGKVLD
LDYVSLLSGA TSPGRNWSTE LLERWTPEHT NTDVPRFTTD NLNWTSTSTR FLYSATYARL
KTVSLGYSLP NRLLSRIGIK SAKVYGLGEN LLTFYGHKGM DPEQSIDGTT YYQYPAMKTF
SVGIQVGL
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