Gene Cpin_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1545 
Symbol 
ID8357687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1888974 
End bp1890131 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content38% 
IMG OID644963726 
Producthypothetical protein 
Protein accessionYP_003121243 
Protein GI256420590 
COG category[S] Function unknown 
COG ID[COG2327] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCA TTAAAACAAA AATTGCCATG ATCGGTATGT ACGGTGGATA TTACCGTGGT 
GACTATAATC CCGGTTGTAT TATGATCTGT CTGAAAACCC GTCAAGAGCT GAAAAAACGA
ATTGAAAACT GCGAAATAGA CATTTTTGCC ATTGATGTTA AAACCAAAAG CAAGGGAATC
GTCAAGGAGC ATAAAGATGG TCTGGACATC AATTTTTTCC CTGCCGGGGA GGGAATAGCC
CTGCTGGAAT CGGTTCTTTC TCAATATGAT GCACTGGTGA TAGGTGGGGA TGTGATATGG
AGTGAGGACT ATGAAAAAGA TGGTAAAATA TTCTTCCTGG ATTCAGCTTC TTTTTTAACC
ACGAAAAAGC CAGTGGTGTT ATTTAACTGC GTACATAGAT TCGAACCGGT AAAGACAAAA
GAGCATTTAT TTTATAATAT AGAGAAGCGA TCCAAATACA TTGCAGTAAG GACAGAATTC
TTCAGAAACG AATTGCATAA AACAGGAATT GATAAGGTGA AAGCTATTCC TGATCCAGTG
CTGGATCTTG AGTTAAAAAA AGTAGAGAAA AAAGCAAGAA CAAAACCATT GATAGGTATC
TCTGTTTCTC TCAAATTGTG CGATCCGCTT ATTGCCATAC TAAAGAACAC CAATCTGTCT
CAATTTGATA TTTGTTTTTA TGCCTACAGT CGTCAATATG ATAATCATGT CACAGTGATG
AAAATGAGAA GTGTTTTTGG TGATCAATTC TCTTACGTTT TAGATTATAA AGATCCTGTA
GATACCTTTG AAATGATCGC TGGTTTTGAT ATATCAGTCA GTGATACTTA TCATGGAACG
ATTTCCGCGA TTATTCAGCA TGTACCGTTT GTCTGTATTA ATACAGAGCC GCTTATCAGT
TCACGGATTA CTTACTTATT GAAACCGTTT GGGTTGGAAA ATCAGATTGT TTCTGCTTAT
CCGGAGACTG GCGAAAGCGA TGCGGAAATG GGGAACAGAT GTTTTCAGGA ATTTAACAGG
TTAATTAATA ATCCTCCAAG CGTCGAAAGC GAGCAATTGA GAGATGTTAA GGAAATTATT
CAACAACATT TTGATGATAT GGCGAATGTG ATTAAAGAAA GCGCGGGGCA GTTGACGAAT
GTATCTGTAA TGGGATGA
 
Protein sequence
MNSIKTKIAM IGMYGGYYRG DYNPGCIMIC LKTRQELKKR IENCEIDIFA IDVKTKSKGI 
VKEHKDGLDI NFFPAGEGIA LLESVLSQYD ALVIGGDVIW SEDYEKDGKI FFLDSASFLT
TKKPVVLFNC VHRFEPVKTK EHLFYNIEKR SKYIAVRTEF FRNELHKTGI DKVKAIPDPV
LDLELKKVEK KARTKPLIGI SVSLKLCDPL IAILKNTNLS QFDICFYAYS RQYDNHVTVM
KMRSVFGDQF SYVLDYKDPV DTFEMIAGFD ISVSDTYHGT ISAIIQHVPF VCINTEPLIS
SRITYLLKPF GLENQIVSAY PETGESDAEM GNRCFQEFNR LINNPPSVES EQLRDVKEII
QQHFDDMANV IKESAGQLTN VSVMG