Gene Cpin_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1539 
Symbol 
ID8357681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1884530 
End bp1884868 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content41% 
IMG OID644963720 
Producthypothetical protein 
Protein accessionYP_003121237 
Protein GI256420584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCC AAAGAGATAA AACTAAAATA ATCAATTACC CACCAGAGAC ATTGAGAACT 
TTTCACGTGA ATGCGTACGA GTGGATAGAT AATCTGAACT TCACTATTAG TCCGGAAGAG
TGTTTGGAAA ATGCGGAGGA GTATGTCAAT ATCGCAAAGG AGATATTTTT GGATGCGGGT
TGGGATGGAG ATGGGAAAAT AGAACTCATG TGGACCCCTC CTTTTTTGCT CCATAACATG
TTGACAGAAG AGTTGACAAA GGGACTTACT ATCTGGCATG TTAAACAAAG GGAAGATGGC
ATCTCCTGGT TGTTGTCGCC AATACAGCTG CCTTATTAG
 
Protein sequence
MNSQRDKTKI INYPPETLRT FHVNAYEWID NLNFTISPEE CLENAEEYVN IAKEIFLDAG 
WDGDGKIELM WTPPFLLHNM LTEELTKGLT IWHVKQREDG ISWLLSPIQL PY