| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1535 |
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| Symbol | |
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| ID | 8357676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1880172 |
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| End bp | 1880753 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644963715 |
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| Product | peptidyl-tRNA hydrolase |
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| Protein accession | YP_003121233 |
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| Protein GI | 256420580 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
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| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.838775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGTACC TGATAGTAGG ATTAGGGAAT ATAGGGACAG AATACGAACA GACGCGCCAT
AATATAGGCT TTGATATAGC AGATGCTTTT GTGAAAAAGC ATGGAGGCAC TTATAGAGAA
GACCGTCTGG CAGATGTAGC CGAAGTAAAA TGGAAAGGCC GCATTTTTGT GGTGATAAAG
CCCACCACTT ATATGAACCT GAGTGGTAAG GCGGTTAAAT ACTGGATGGA TAAGGAGAAA
GTGCCACTGG AAAATATACT GGTATTAGTA GATGATCTGG CATTACCATT GGAAGTAATT
CGTCTGCGTC CGGGTGGCAG CGATGCAGGA CAGAACGGGC TGAAAAGTAT CCAGGAATTA
CTAGGCACCA ATCAGTACCC ACGTTTGCGC TTTGGTATCG GTAATAATTA CCCGCGTGGA
AGACAGGTGG AGTTTGTATT GGGTAAATGG ACGAATGACG AATGGCCTGT GGTGATGGGC
AAGCTGGGGA AATGTGTGGA ATTGATTGAG AGTTATGCTT CCATCGGATT GCCCCGTACC
ATGAATATCT ACAACACATT GAGCTACCCT TATGATAAAT AA
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| Protein sequence | MKYLIVGLGN IGTEYEQTRH NIGFDIADAF VKKHGGTYRE DRLADVAEVK WKGRIFVVIK
PTTYMNLSGK AVKYWMDKEK VPLENILVLV DDLALPLEVI RLRPGGSDAG QNGLKSIQEL
LGTNQYPRLR FGIGNNYPRG RQVEFVLGKW TNDEWPVVMG KLGKCVELIE SYASIGLPRT
MNIYNTLSYP YDK
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