| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1533 |
|---|
| Symbol | |
|---|
| ID | 8357674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 1878460 |
|---|
| End bp | 1879407 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644963713 |
|---|
| Product | ribose-phosphate pyrophosphokinase |
|---|
| Protein accession | YP_003121231 |
|---|
| Protein GI | 256420578 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
|---|
| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCAT CAGTAAAAAT TTTCACAGGG AACAGTAACA CAGCTCTTGC AGAGAAAATT
GCAAAGCGTT ACGGTAACGG TCTGGGCAAA CTGACCATAC AGAAATTCAG CGATGGCGAG
TTCCAGCCAA TCTACATGGA AAGTATCCGT GGTGATTATG TTTTCCTGAT ACAGAGCACC
AACGCTCCAT CTGACAATCT GATGGAACTG TTGATGATGA TAGATGCAGC TAAAAGGGCA
TCTGCAGGTT ACATCACTGC TGTAATTCCA TATTTCGGTT TCGCGAGACA GGACAGGAAG
GACAAGCCAA GGGTAGCCAT TGCATCCAAG CTGGTGGCTA ATCTGTTGAC TTCGGCTGGT
GCTAATCGTG TGATAACCAT GGACTTACAT GCTCCGCAGA TCCAGGGTTT CTTCGATATC
CCGGTAGATC ACCTGGATAG TTCTGCAATA TTCATCCCGT ATATCGAGAA TTTGAAGCTG
GAAAACCTTA CCTTTGCGTC CCCTGACGTA GGTAGCACTA ATAGGGTAAG GGAAGTTGCG
TCCTATTTCA ATGCTGAAAT GGTGATCTGT GACAAACACC GTAAACGTGC GAATGAGATT
GCCTCCATGG TGGTGATCGG TGATGTAAAG GACAGGGATA TCGTATTGAT CGATGATATC
TGCGACACTG CAGGTACACT GACCAAAGCG GCCAACCTGC TGAAAGAGAA AGGGGCGAGA
AGTGTAAGAG CTTTCTGTAC GCATCCGGTA TTGAGTGGTA AAGCGTTTGA CAATATCACT
AATTCCGTAC TGGAAGAGCT GGTGATCTGC GATACGATCC CGCTGAAACA GCAGAGTCCA
AAGATCAAAG TGATCAGCGT GGCCGACCTC TTTGCAGTAG CTATCCGTAA CATGCACGAA
AACAGGTCTA TTACAAACCT GTTCGTTCAT AGCCACCGCA GGGTCTAA
|
|---|
| Protein sequence | MQPSVKIFTG NSNTALAEKI AKRYGNGLGK LTIQKFSDGE FQPIYMESIR GDYVFLIQST
NAPSDNLMEL LMMIDAAKRA SAGYITAVIP YFGFARQDRK DKPRVAIASK LVANLLTSAG
ANRVITMDLH APQIQGFFDI PVDHLDSSAI FIPYIENLKL ENLTFASPDV GSTNRVREVA
SYFNAEMVIC DKHRKRANEI ASMVVIGDVK DRDIVLIDDI CDTAGTLTKA ANLLKEKGAR
SVRAFCTHPV LSGKAFDNIT NSVLEELVIC DTIPLKQQSP KIKVISVADL FAVAIRNMHE
NRSITNLFVH SHRRV
|
|---|
| |