Gene Cpin_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1525 
Symbol 
ID8357666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1869717 
End bp1871135 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content47% 
IMG OID644963705 
ProductGlu/Leu/Phe/Val dehydrogenase 
Protein accessionYP_003121223 
Protein GI256420570 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAAG AGCAACATTA TGACTTCTTT CAGAGCGTTG AAAGAAGTTT TGACAAAGCC 
GCAAAATTCA CGAAATGGGA AAAGGGCATT CTGGAACAGA TCAAAGCCTG TAATGCCGTG
TACCGTATGA AATTCCCGGT ACGCGTAGGT GACACGATCG AAGTAATAGA AGCCTACCGC
GTTCAGCACT CTCACCACAA ACTGCCTTGT AAAGGTGGTA TCCGTTTCAG CGATGCTGTA
AACCAGGACG AAGTAATGGC CCTGGCAGCA TTGATGACTT ACAAATGCGC TATCGTTAAC
GTTCCTTTCG GTGGAGCCAA AGGAGGTATT AAGATCAATC CACGTAACTA TTCCCCGTTC
CAGTTAGAAA ACATCACCCG CCGTTACACT GCGGAACTTG TTAAGAAAAA CTTCATCGGC
CCGGGCGTAG ACGTTCCTGC TCCGGACTAT GGTACCGGCG AAAGGGAAAT GAGCTGGATC
CTCGATACTT ACATGAGCCT CCGTCCCGGA GAGATCGACG GTTACGGTTG CGTAACAGGT
AAACCGGTTT CTCAGGGTGG TGTACGTGGT CGTAAAGAAG CTACTGGTCT CGGTGTATTC
TATGGTCTCC AGGAGCTGTG TAATATCAAA GAAGATATGC AGCGTCTTGG TCTGGAACCA
GGTATCATCG GTAAAAAAGT AATTGTACAG GGTATGGGTA ACGTGGGTTA CCATGCCGCT
AAATATTTTC ATGAAGCAGG CGCGGTGATC GTTGGTCTGA TTGAGTGGGA TGGTGCACTG
TACAGCGATA AAGGTATGGA TCCTGATGCA GTACTGAAGC ACAGAAATGA AACAGGTTCT
ATCGTTAATT TCCCAGGTGC TACTACATTG AAAAACAATG CAGAAGGTCT GGAAATGGAT
TGCGATATCC TGATCCCTGC CGCGCTGGAA AATGTCATCC ATAAAGAAAA TGCGCCTCGT
ATCAAGGCAA AGATCATCGG TGAAGCTGCA AACGGTCCTA TTACACCGGA AGCTGACGAA
ATCCTGAACC AGAAAGGTGT GATCGTTGTG CCGGATATGT TCCTGAACGC AGGTGGTGTA
ACCGTTTCTT ACTTTGAATG GTTAAAAAAC CTTAGCCACG TACGTTATGG CCGTCTGGGC
AAACGCTTCG ACGAAAATAT GAACATTCAC ATCCTGAGCG TGATCGAAGA CCTTACCGGT
AAATCCGTAT CCGACAGAGA AAGAAAGTTC ATTGCACACG GTGCTGATGA GGTAGATCTG
GTGTATTCCG GTCTGGAAGA AACCATGCAC GCTGCATTAC ATGAAGTGCG TACCATCATG
ATGAACCACA AAGACATCCA TGATATGCGT ACCGCTGCTT ATGTATGCGC TATTGATAAA
GTAGGTGCTG CTTACGATCA GCTGGGTATC TTCCCTTGA
 
Protein sequence
MAQEQHYDFF QSVERSFDKA AKFTKWEKGI LEQIKACNAV YRMKFPVRVG DTIEVIEAYR 
VQHSHHKLPC KGGIRFSDAV NQDEVMALAA LMTYKCAIVN VPFGGAKGGI KINPRNYSPF
QLENITRRYT AELVKKNFIG PGVDVPAPDY GTGEREMSWI LDTYMSLRPG EIDGYGCVTG
KPVSQGGVRG RKEATGLGVF YGLQELCNIK EDMQRLGLEP GIIGKKVIVQ GMGNVGYHAA
KYFHEAGAVI VGLIEWDGAL YSDKGMDPDA VLKHRNETGS IVNFPGATTL KNNAEGLEMD
CDILIPAALE NVIHKENAPR IKAKIIGEAA NGPITPEADE ILNQKGVIVV PDMFLNAGGV
TVSYFEWLKN LSHVRYGRLG KRFDENMNIH ILSVIEDLTG KSVSDRERKF IAHGADEVDL
VYSGLEETMH AALHEVRTIM MNHKDIHDMR TAAYVCAIDK VGAAYDQLGI FP